RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FARS2O95363 451 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 TGFB3P10600 412 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 ATP1A3P13637 1013 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 OTX2P32243 289 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 GRK6P43250 576 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 C5orf22Q49AR2 442 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 SVOPQ8N4V2 548 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 PTCD2Q8WV60 388 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 CELF4Q9BZC1 486 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 CEP44Q9C0F1 390 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 KCNE2Q9Y6J6 123 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 TRAFD1O14545 582 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 CDC42P60953 191 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 ARG2P78540 354 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 GCNT1Q02742 428 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 PCDH1Q08174 1060 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 TOP3AQ13472 1001 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 PUM1Q14671 1186 aaKnown RBP eCLIP8.93□□□□□ -0.98
VCAN-208ENST00000512590 CAPN13Q6MZZ7 669 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 OR4A15Q8NGL6 344 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 OTUB2Q96DC9 234 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 TKTL2Q9H0I9 626 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 NGBQ9NPG2 151 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 LIMD1Q9UGP4 676 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 FBXO9Q9UK97 447 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 COG5Q9UP83 839 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 FRMPD4Q14CM0 1322 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 SSNA1O43805 119 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 TSPAN5P62079 268 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 MRPS25P82663 173 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 TAB1Q15750 504 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 AGKQ53H12 422 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 TRIM40Q6P9F5 258 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 ZNF720Q7Z2F6 126 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 ANKS1BQ7Z6G8 1248 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 HORMAD2Q8N7B1 307 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 PNLDC1Q8NA58 520 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 ADAM32Q8TC27 787 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 QKIQ96PU8 341 aaKnown RBP eCLIP8.93□□□□□ -0.98
VCAN-208ENST00000512590 KDM5CP41229 1560 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 PLEKHG1Q9ULL1 1385 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 MAGEB16A2A368 324 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 LAMP2P13473 410 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 FAUP35544 74 aaKnown RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 TOB1P50616 345 aaPredicted RBP8.93□□□□□ -0.98
VCAN-208ENST00000512590 NAB2Q15742 525 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 NKAPLQ5M9Q1 402 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 SCIMPQ6UWF3 145 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 SLC9B2Q86UD5 537 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 LPPQ93052 612 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 RCOR1Q9UKL0 485 aa8.93□□□□□ -0.98
VCAN-208ENST00000512590 REM1O75628 298 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 S100A9P06702 114 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 YBX3P16989 372 aaKnown RBP eCLIP8.92□□□□□ -0.98
VCAN-208ENST00000512590 TNFSF4P23510 183 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CASP4P49662 377 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ZNF844Q08AG5 666 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CDH17Q12864 832 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 MTM1Q13496 603 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 SNAPC1Q16533 368 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 RPAINQ86UA6 219 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 PLCZ1Q86YW0 608 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CLEC10AQ8IUN9 316 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 WDR49Q8IV35 697 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ZNF565Q8N9K5 539 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 TC2NQ8N9U0 490 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 FNIP1Q8TF40 1166 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 SLC22A17Q8WUG5 538 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 S100PBPQ96BU1 408 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 OSBPL3Q9H4L5 887 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 GRIP1Q9Y3R0 1128 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 HCN1O60741 890 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 LRPAP1P30533 357 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 RYKP34925 604 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ACTR1BP42025 376 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 RPL11P62913 178 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 MYBPHQ13203 477 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ZMIZ2Q8NF64 920 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 EZH1Q92800 747 aaPredicted RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 NELL1Q92832 810 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 PPCDCQ96CD2 204 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 NPAS2Q99743 824 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 OSBPL8Q9BZF1 889 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 REEP1Q9H902 201 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ACAD8Q9UKU7 415 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 INSL6Q9Y581 213 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 PZPP20742 1482 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 OR5H15A6NDH6 313 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 OR5H14A6NHG9 310 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 OR5H1A6NKK0 313 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 MGAT1P26572 445 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 RAB28P51157 221 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CNTN2Q02246 1040 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 PRMT9Q6P2P2 845 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 KCNIP4Q6PIL6 250 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 TMPRSS9Q7Z410 1059 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 RAB43Q86YS6 212 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 C4orf33Q8N1A6 199 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 POC5Q8NA72 575 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms