RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 ZMYM6O95789 1325 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 SPATA31A1Q5TZJ5 1347 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 CDHR2Q9BYE9 1310 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 SYNRGQ9UMZ2 1314 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 TIAM2Q8IVF5 1701 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 VPS37CA5D8V6 355 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 VWA3AA6NCI4 1184 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 SH2B2O14492 632 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 DYNC1I1O14576 645 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PRYO14603 147 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PSMA7O14818 248 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PCDH17O14917 1159 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 NEMFO60524 1076 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 GJB3O75712 270 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 CCNDBP1O95273 360 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 VIPP01282 170 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 T-ENOLP0DO92 83 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PECAM1P16284 738 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 TBXAS1P24557 533 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 EEF1DP29692 281 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 GRK5P34947 590 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 KRT2P35908 639 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PGM1P36871 562 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PAFAH1B1P43034 410 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 RFX5P48382 616 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 NT5C2P49902 561 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 TPD52P55327 224 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 KYNUQ16719 465 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 TCP11X2Q5H9J9 407 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 ARMC4Q5T2S8 1044 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 SLC22A25Q6T423 547 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 SASS6Q6UVJ0 657 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 RBM43Q6ZSC3 357 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 BTN2A1Q7KYR7 527 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 COPS6Q7L5N1 327 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PIP4P1Q86T03 277 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 RHPN2Q8IUC4 686 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 CEP97Q8IW35 865 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 CCDC170Q8IYT3 715 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 CCAR2Q8N163 923 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 TTC39CQ8N584 583 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 SLC44A5Q8NCS7 719 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 NFKBIDQ8NI38 313 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 GDAP1Q8TB36 358 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 ETNPPLQ8TBG4 499 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PIBF1Q8WXW3 757 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 ZNF622Q969S3 477 aaKnown RBP eCLIP4.47□□□□□ -1.691e-7■□□□□ 11.3
CALCOCO2-208ENST00000506971 JAKMIP2Q96AA8 810 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 CENPTQ96BT3 561 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 ZNF396Q96N95 335 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 ABHD14AQ9BUJ0 271 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 NAT10Q9H0A0 1025 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 SEMA4BQ9NPR2 832 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 FBXO28Q9NVF7 368 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 TRMT1Q9NXH9 659 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 MSRB1Q9NZV6 116 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 NDUFAF4Q9P032 175 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 DBNLQ9UJU6 430 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 UTS2RQ9UKP6 389 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 DAPP1Q9UN19 280 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 DNAJC16Q9Y2G8 782 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 MTF2Q9Y483 593 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 PSAT1Q9Y617 370 aa4.47□□□□□ -1.69
CALCOCO2-208ENST00000506971 A0A0D9SFI3 127 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 SAC3D1A6NKF1 404 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 E7EVH7 732 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PTGES3LE9PB15 166 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 H3BQV1 296 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CTIFO43310 598 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 DNPH1O43598 174 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PFKFB2O60825 505 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 NTSR2O95665 410 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 AFPP02771 609 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ENO1P06733 434 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 AKR1A1P14550 325 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 IFNAR1P17181 557 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 MATN1P21941 496 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 EPHA8P29322 1005 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CCKBRP32239 447 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 THBS4P35443 961 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 EIF2DP41214 584 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 RGS2P41220 211 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 CD86P42081 329 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 STAT6P42226 847 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 DPP6P42658 865 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 TDO2P48775 406 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ALDH7A1P49419 539 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZNF41P51814 821 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ZNF132P52740 706 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 EVCP57679 992 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 RPP30P78346 268 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 B4GALNT1Q00973 533 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 AP1B1Q10567 949 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 COG2Q14746 738 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PTGR1Q14914 329 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 TWIST1Q15672 202 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 ME3Q16798 604 aa4.46□□□□□ -1.7
CALCOCO2-208ENST00000506971 PRICKLE4Q2TBC4 344 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms