RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 KRT10P13645 584 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 MYOD1P15172 320 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 CORO1AP31146 461 aaKnown RBP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 TIMP3P35625 211 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 GGT5P36269 586 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 USP8P40818 1118 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 METAP2P50579 478 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 ATP12AP54707 1039 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 UFM1P61960 85 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 PDE1BQ01064 536 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 CCDC96Q2M329 555 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 STXBP5Q5T5C0 1151 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 LRRTM4Q86VH4 590 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 SPATA6LQ8N4H0 392 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 METTL27Q8N6F8 245 aaPredicted RBP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 SLC24A4Q8NFF2 622 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 PABPC5Q96DU9 382 aaKnown RBP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 ALG14Q96F25 216 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 KLHL15Q96M94 604 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 DUX3Q96PT4 197 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 PCYT2Q99447 389 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 MTERF1Q99551 399 aaKnown RBP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 HERPUD2Q9BSE4 406 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 GPR63Q9BZJ6 419 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 MMP25Q9NPA2 562 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 HINT3Q9NQE9 182 aaKnown RBP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 TTC7AQ9ULT0 858 aaPredicted RBP3.89□□□□□ -1.79
LINC00616-202ENST00000505874 TCF19Q9Y242 345 aa3.89□□□□□ -1.79
LINC00616-202ENST00000505874 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 GOLGA6L9A6NEM1 432 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 GAGE10A6NGK3 116 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 DVL1O14640 695 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 TNPO2O14787 897 aaKnown RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 PEX14O75381 377 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 APOHP02749 345 aaPredicted RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 SERPINB2P05120 415 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 IFIT1P09914 478 aaKnown RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 FGF5P12034 268 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 RRM1P23921 792 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 CDKN1AP38936 164 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 RAD23BP54727 409 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 DVL1P1P54792 670 aaPredicted RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 ISL1P61371 349 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 PITX1P78337 314 aaPredicted RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 TAF12Q16514 161 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 KRT24Q2M2I5 525 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 TRNP1Q6NT89 227 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 METTL2BQ6P1Q9 378 aaKnown RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 KCTD8Q6ZWB6 473 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 HAPLN4Q86UW8 402 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 ANKRD18AQ8IVF6 992 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 ANKRD42Q8N9B4 389 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 ZBTB10Q96DT7 871 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 METTL2AQ96IZ6 378 aaKnown RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 GLIS2Q9BZE0 524 aaPredicted RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 TMEM160Q9NX00 188 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 SLC25A10Q9UBX3 287 aaPredicted RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 FAF1Q9UNN5 650 aaPredicted RBP3.88□□□□□ -1.79
LINC00616-202ENST00000505874 ERVK-11Q9UQG0 969 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 LOXL2Q9Y4K0 774 aa3.88□□□□□ -1.79
LINC00616-202ENST00000505874 SNAP23O00161 211 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 SEC14L5O43304 696 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 PRSS1P07477 247 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 COX7A2P14406 83 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 GM2AP17900 193 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 CNTFP26441 200 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 NAE1Q13564 534 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 SLC9B1Q4ZJI4 515 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 GGNBP1Q5YKI7 109 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 DUS1LQ6P1R4 473 aaKnown RBP3.87□□□□□ -1.79
LINC00616-202ENST00000505874 QSOX2Q6ZRP7 698 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 GRAPLQ8TC17 118 aaPredicted RBP3.87□□□□□ -1.79
LINC00616-202ENST00000505874 ZNF501Q96CX3 271 aaPredicted RBP3.87□□□□□ -1.79
LINC00616-202ENST00000505874 KIF1BPQ96EK5 621 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 SH3GL2Q99962 352 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 H2AFJQ9BTM1 129 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 PLEKHA4Q9H4M7 779 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 ZNF696Q9H7X3 374 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 DDX43Q9NXZ2 648 aaKnown RBP3.87□□□□□ -1.79
LINC00616-202ENST00000505874 A4GNTQ9UNA3 340 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 OR2W1Q9Y3N9 320 aa3.87□□□□□ -1.79
LINC00616-202ENST00000505874 LILRA5A6NI73 299 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 EDIL3O43854 480 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 FTCDO95954 541 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 LDLRP01130 860 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 HNRNPA1P09651 372 aaKnown RBP eCLIP3.86□□□□□ -1.79
LINC00616-202ENST00000505874 DDX5P17844 614 aaKnown RBP3.86□□□□□ -1.79
LINC00616-202ENST00000505874 CD53P19397 219 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 GNAQP50148 359 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 RPP30P78346 268 aaKnown RBP3.86□□□□□ -1.79
LINC00616-202ENST00000505874 SREBF2Q12772 1141 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 PDSS1Q5T2R2 415 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 ZNF852Q6ZMS4 543 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 ASB18Q6ZVZ8 466 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 HMGCLL1Q8TB92 370 aa3.86□□□□□ -1.79
LINC00616-202ENST00000505874 KLHL29Q96CT2 875 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms