RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 FBXO9Q9UK97 447 aaPredicted RBP3.3□□□□□ -1.88
CBWD1-216ENST00000489272 IGKV3D-20A0A0C4DH25 116 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 MT-CYBP00156 380 aaPredicted RBP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 HEXAP06865 529 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 TUBBP07437 444 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 KRT5P13647 590 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 MYOD1P15172 320 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 BDKRB2P30411 391 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 TUBB4BP68371 445 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 EFNB1P98172 346 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 PDE1BQ01064 536 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 PPIGQ13427 754 aaKnown RBP eCLIP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 SLC12A1Q13621 1099 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 EFR3AQ14156 821 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 HIST2H2ACQ16777 129 aaPredicted RBP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 ZNF876PQ49A33 203 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 SGO1Q5FBB7 561 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 GPATCH4Q5T3I0 446 aaKnown RBP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 METTL2BQ6P1Q9 378 aaKnown RBP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 CPLX2Q6PUV4 134 aaKnown RBP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 CEACAM20Q6UY09 585 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 TMTC1Q8IUR5 882 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 ZNF34Q8IZ26 560 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 C11orf65Q8NCR3 313 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 ZNF248Q8NDW4 579 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 OR2AK2Q8NG84 335 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 OR10V1Q8NGI7 309 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 METTL2AQ96IZ6 378 aaKnown RBP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 SH3GL2Q99962 352 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 REEP2Q9BRK0 252 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 SYT17Q9BSW7 474 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 GPR108Q9NPR9 543 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 FAM96BQ9Y3D0 163 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 LOXL2Q9Y4K0 774 aa3.29□□□□□ -1.88
CBWD1-216ENST00000489272 TP53BP1Q12888 1972 aaPredicted RBP3.29□□□□□ -1.88
CBWD1-216ENST00000489272 SMCHD1A6NHR9 2005 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 WDR1O75083 606 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 INHBAP08476 426 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 PAX1P15863 534 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 ALDH4A1P30038 563 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 CORO1AP31146 461 aaKnown RBP3.28□□□□□ -1.88
CBWD1-216ENST00000489272 METAP2P50579 478 aaKnown RBP eCLIP3.28□□□□□ -1.88
CBWD1-216ENST00000489272 ARL4CP56559 192 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 EEF1A1P68104 462 aaKnown RBP3.28□□□□□ -1.88
CBWD1-216ENST00000489272 SLC45A4Q5BKX6 768 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 SIRPB2Q5JXA9 342 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 WDR45BQ5MNZ6 344 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 STXBP5Q5T5C0 1151 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 EEF1A1P5Q5VTE0 462 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 SLC35E4Q6ICL7 350 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 LCTLQ6UWM7 567 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 ZBTB2Q8N680 514 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 PLD5Q8N7P1 536 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 CADM4Q8NFZ8 388 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 RUFY2Q8WXA3 655 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 CCT6BQ92526 530 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 LGALS12Q96DT0 336 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 SLC39A13Q96H72 371 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 C17orf77Q96MU5 243 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 LITAFQ99732 161 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 CMKLR1Q99788 373 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 PYM1Q9BRP8 204 aaKnown RBP3.28□□□□□ -1.88
CBWD1-216ENST00000489272 PPP1R3EQ9H7J1 279 aa3.28□□□□□ -1.88
CBWD1-216ENST00000489272 BEX4Q9NWD9 120 aaPredicted RBP3.28□□□□□ -1.88
CBWD1-216ENST00000489272 TTC7AQ9ULT0 858 aaPredicted RBP3.28□□□□□ -1.88
CBWD1-216ENST00000489272 GOLGA6L10A0A0M3HER8 536 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 TEX22C9J3V5 150 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 GALTP07902 379 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 IRF1P10914 325 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 DDIT3P35638 169 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 FOXD4Q12950 439 aaPredicted RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 GAGE5Q13069 117 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 GAGE6Q13070 117 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 GTF2H2Q13888 395 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 ZNF234Q14588 700 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 PPP2R5BQ15173 497 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 CCDC96Q2M329 555 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 FBXO47Q5MNV8 452 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 MAP3K21Q5TCX8 1036 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 GGNBP1Q5YKI7 109 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 GTF2H2CQ6P1K8 395 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 TMEM81Q6P7N7 255 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 FBXO46Q6PJ61 603 aaPredicted RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 ASB18Q6ZVZ8 466 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 TDRPQ86YL5 185 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 SUGP1Q8IWZ8 645 aaKnown RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 DHX40Q8IX18 779 aaKnown RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 ADAD2Q8NCV1 583 aaKnown RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 KLHDC9Q8NEP7 349 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 HUS1BQ8NHY5 278 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 ELP4Q96EB1 424 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 MTERF1Q99551 399 aaKnown RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 POLR3CQ9BUI4 534 aaPredicted RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 PHF7Q9BWX1 381 aaPredicted RBP3.27□□□□□ -1.89
CBWD1-216ENST00000489272 KCNN2Q9H2S1 579 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 NDST4Q9H3R1 872 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 MMP25Q9NPA2 562 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 C20orf141Q9NUB4 165 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 TMEM160Q9NX00 188 aa3.27□□□□□ -1.89
CBWD1-216ENST00000489272 DLGAP4Q9Y2H0 992 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms