RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 CCDC38Q502W7 563 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 INTS11Q5TA45 600 aaKnown RBP2.11□□□□□ -2.07
USP9X-208ENST00000487625 IRAK1BP1Q5VVH5 260 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 LRRC8EQ6NSJ5 796 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 C17orf99Q6UX52 265 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 MMS22LQ6ZRQ5 1243 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ANKRD23Q86SG2 305 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 TBC1D26Q86UD7 250 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 NOXA1Q86UR1 476 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.11□□□□□ -2.07
USP9X-208ENST00000487625 CPXM2Q8N436 756 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 PAF1Q8N7H5 531 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 NKAIN3Q8N8D7 197 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ANKRD42Q8N9B4 389 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 C1orf131Q8NDD1 294 aaKnown RBP2.11□□□□□ -2.07
USP9X-208ENST00000487625 PPHLN1Q8NEY8 458 aaKnown RBP2.11□□□□□ -2.07
USP9X-208ENST00000487625 FAM222BQ8WU58 562 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ABTB1Q969K4 478 aaPredicted RBP2.11□□□□□ -2.07
USP9X-208ENST00000487625 RILPL2Q969X0 211 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 SKA1Q96BD8 255 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 SDCCAG3Q96C92 435 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ZC3HAV1LQ96H79 300 aaKnown RBP2.11□□□□□ -2.07
USP9X-208ENST00000487625 MPP4Q96JB8 637 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ZNF583Q96ND8 569 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 NEUROD6Q96NK8 337 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ZHX3Q9H4I2 956 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 EPHX3Q9H6B9 360 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ESRP2Q9H6T0 727 aaKnown RBP2.11□□□□□ -2.07
USP9X-208ENST00000487625 SAYSD1Q9NPB0 183 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 CNGB3Q9NQW8 809 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 TMEM30AQ9NV96 361 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 C9orf78Q9NZ63 289 aaPredicted RBP2.11□□□□□ -2.07
USP9X-208ENST00000487625 CLIC5Q9NZA1 410 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 PDP2Q9P2J9 529 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 POLG2Q9UHN1 485 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 DNAJC16Q9Y2G8 782 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 DERAQ9Y315 318 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 DAAM1Q9Y4D1 1078 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 PCDHGB5Q9Y5G0 923 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 DGKBQ9Y6T7 804 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ITIH6Q6UXX5 1313 aa2.11□□□□□ -2.07
USP9X-208ENST00000487625 ARHGAP10A1A4S6 786 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 PMS2P5A8MQ11 134 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 RNASEH2AO75792 299 aaKnown RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 PRSS1P07477 247 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 CYC1P08574 325 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 PATE4P0C8F1 98 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 G6PDP11413 515 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 VDRP11473 427 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 PTPN2P17706 415 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 S1PR1P21453 382 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 MCCP23508 829 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 EIF2S3P41091 472 aaKnown RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 AARSP49588 968 aaKnown RBP eCLIP2.1□□□□□ -2.07
USP9X-208ENST00000487625 SEC61BP60468 96 aaKnown RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 LMOD3Q0VAK6 560 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 DDX10Q13206 875 aaKnown RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 PPIGQ13427 754 aaKnown RBP eCLIP2.1□□□□□ -2.07
USP9X-208ENST00000487625 CCDC96Q2M329 555 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 CTXN3Q4LDR2 81 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 KCNT1Q5JUK3 1230 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 MZT2BQ6NZ67 158 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 CFAP161Q6P656 301 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 MTSS1LQ765P7 747 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 ZNF354CQ86Y25 554 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 KMT5CQ86Y97 462 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 WDR63Q8IWG1 891 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 KIAA2013Q8IYS2 634 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 C1orf87Q8N0U7 546 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 FBXL16Q8N461 479 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 METTL27Q8N6F8 245 aaPredicted RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 ANKRD52Q8NB46 1076 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 KLHDC9Q8NEP7 349 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 OR2AK2Q8NG84 335 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 POF1BQ8WVV4 589 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 CNOT9Q92600 299 aaKnown RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 RUBCNQ92622 972 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 PPM1MQ96MI6 270 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 KXD1Q9BQD3 176 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 MXRA8Q9BRK3 442 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 NUF2Q9BZD4 464 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 MROH8Q9H579 483 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 STN1Q9H668 368 aaKnown RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 PCDH9Q9HC56 1237 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 HCFC1R1Q9NWW0 138 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 MCM9Q9NXL9 1143 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 CTNNAL1Q9UBT7 734 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 FBXO2Q9UK22 296 aaPredicted RBP2.1□□□□□ -2.07
USP9X-208ENST00000487625 RNF215Q9Y6U7 377 aa2.1□□□□□ -2.07
USP9X-208ENST00000487625 B9A039 149 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 EPB41L2O43491 1005 aaKnown RBP2.09□□□□□ -2.07
USP9X-208ENST00000487625 WEE2P0C1S8 567 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 PCNAP12004 261 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 MYOD1P15172 320 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 RXRAP19793 462 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 NR1D1P20393 614 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 USP8P40818 1118 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 GRK6P43250 576 aa2.09□□□□□ -2.07
USP9X-208ENST00000487625 PPM1FP49593 454 aaPredicted RBP2.09□□□□□ -2.07
USP9X-208ENST00000487625 ACTR2P61160 394 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms