RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ELP3Q9H9T3 547 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 ITM2CQ9NQX7 267 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 SETD4Q9NVD3 440 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 PRPF19Q9UMS4 504 aaKnown RBP8.4□□□□□ -1.07
VAPB-205ENST00000476395 KCNH4Q9UQ05 1017 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 YJEFN3A6XGL0 299 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 AGRPO00253 132 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 SDHDO14521 159 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 TRIM24O15164 1050 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 PHGDHO43175 533 aaKnown RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 TRIM13O60858 407 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 RECQL4O94761 1208 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 WISP3O95389 354 aaPredicted RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 GLRBP48167 497 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 LSM3P62310 102 aaKnown RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 INAQ16352 499 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 RFPL4BQ6ZWI9 263 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 KRT77Q7Z794 578 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 PGAM4Q8N0Y7 254 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 FSTL5Q8N475 847 aaPredicted RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 ABHD11Q8NFV4 315 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 OR9I1Q8NGQ6 314 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 HM13Q8TCT9 377 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 HSFY1Q96LI6 401 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 CGREF1Q99674 301 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 DOK1Q99704 481 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 ADI1Q9BV57 179 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 CRTAC1Q9NQ79 661 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 SARDHQ9UL12 918 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 ERVK-11Q9UQG0 969 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 V9GYQ6 96 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 MEIS3P2A8K0S8 358 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 GABRDO14764 452 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 TNPO2O14787 897 aaKnown RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 BCL10O95999 233 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 ENO2P09104 434 aaPredicted RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 CCNA2P20248 432 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 SAT1P21673 171 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 PGFP49763 221 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 GJA9P57773 515 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 C1QTNF8P60827 252 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 E2F2Q14209 437 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 FAM214AQ32MH5 1076 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 FSCBQ5H9T9 825 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 RAB41Q5JT25 222 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 DENND6AQ8IWF6 608 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 TTC39CQ8N584 583 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 TXNDC5Q8NBS9 432 aaKnown RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 KCTD4Q8WVF5 259 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 TRUB1Q8WWH5 349 aaKnown RBP8.39□□□□□ -1.07
VAPB-205ENST00000476395 SNX19Q92543 992 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 OTUD5Q96G74 571 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 MAGED4Q96JG8 741 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 KIFC1Q9BW19 673 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 DUSP16Q9BY84 665 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 IL1RL2Q9HB29 575 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 ITGB1BP2Q9UKP3 347 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 LAMA3Q16787 3333 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 DOCK4Q8N1I0 1966 aa8.39□□□□□ -1.07
VAPB-205ENST00000476395 CCDC78A2IDD5 438 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 KPNA7A9QM74 516 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 UBFD1O14562 309 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 PTGESO14684 152 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 PIGNO95427 931 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 MPOP05164 745 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 NFKB1P19838 968 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 ATP6V1B2P21281 511 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 NOS2P35228 1153 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 ADRA1BP35368 520 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 GNL1P36915 607 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 RACK1P63244 317 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 MPP1Q00013 466 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 GRIK4Q16099 956 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 ZNF789Q5FWF6 425 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 OTOP3Q7RTS5 596 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 KCNMB4Q86W47 210 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 LGI2Q8N0V4 545 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SMG8Q8ND04 991 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 IPCEF1Q8WWN9 437 aaPredicted RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 KCTD13Q8WZ19 329 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SGF29Q96ES7 293 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 GLT1D1Q96MS3 346 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SMOQ99835 787 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 NAT9Q9BTE0 207 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SNX25Q9H3E2 840 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 IARS2Q9NSE4 1012 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 UBP1Q9NZI7 540 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 KLK14Q9P0G3 267 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 CD300AQ9UGN4 299 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SLC2A6Q9UGQ3 507 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 RAP2CQ9Y3L5 183 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 CDY2AQ9Y6F7 541 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 CDY1Q9Y6F8 540 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 HDAC3O15379 428 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 MSI1O43347 362 aaKnown RBP8.38□□□□□ -1.07
VAPB-205ENST00000476395 CLPXO76031 633 aa8.38□□□□□ -1.07
VAPB-205ENST00000476395 SLC25A27O95847 323 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms