RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CNBD1Q8NA66 436 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 ALG14Q96F25 216 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 F2RL3Q96RI0 385 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 EGLN1Q9GZT9 426 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 GFRA4Q9GZZ7 299 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 KCNN2Q9H2S1 579 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 GPR108Q9NPR9 543 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 BEX4Q9NWD9 120 aaPredicted RBP4.53□□□□□ -1.68
CD46-213ENST00000471987 TTC7AQ9ULT0 858 aaPredicted RBP4.53□□□□□ -1.68
CD46-213ENST00000471987 GREB1LQ9C091 1923 aaPredicted RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 ERI2A8K979 691 aaKnown RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 EIF5BO60841 1220 aaKnown RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 URODP06132 367 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 IRF1P10914 325 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 MYOD1P15172 320 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 BDKRB2P30411 391 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 SHMT1P34896 483 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 HSD17B4P51659 736 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 OS9Q13438 667 aaPredicted RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 PPP2R5BQ15173 497 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 KRT71Q3SY84 523 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 SLC45A4Q5BKX6 768 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 ZNF766Q5HY98 468 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 FBXO46Q6PJ61 603 aaPredicted RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 ZNF852Q6ZMS4 543 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 BBS12Q6ZW61 710 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 DGLUCYQ7Z3D6 616 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 DHX40Q8IX18 779 aaKnown RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 SPATA6LQ8N4H0 392 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 ZNF485Q8NCK3 441 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 TAS1R2Q8TE23 839 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 SYT17Q9BSW7 474 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 NDST4Q9H3R1 872 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 CNOT7Q9UIV1 285 aaKnown RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 FAF1Q9UNN5 650 aaPredicted RBP4.52□□□□□ -1.69
CD46-213ENST00000471987 LOXL2Q9Y4K0 774 aa4.52□□□□□ -1.69
CD46-213ENST00000471987 PMS2P5A8MQ11 134 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 WDR1O75083 606 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 TACC1O75410 805 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 TFP02787 698 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 PAX1P15863 534 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 CORO1AP31146 461 aaKnown RBP4.51□□□□□ -1.69
CD46-213ENST00000471987 PGM1P36871 562 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 CDH15P55291 814 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 FOXD4Q12950 439 aaPredicted RBP4.51□□□□□ -1.69
CD46-213ENST00000471987 NFIL3Q16649 462 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 C2orf68Q2NKX9 166 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 C10orf62Q5T681 223 aaPredicted RBP4.51□□□□□ -1.69
CD46-213ENST00000471987 GGNBP1Q5YKI7 109 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 TXNDC8Q6A555 127 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 LCTLQ6UWM7 567 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 OR2AK2Q8NG84 335 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 HUS1BQ8NHY5 278 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 MTERF1Q99551 399 aaKnown RBP4.51□□□□□ -1.69
CD46-213ENST00000471987 INTS2Q9H0H0 1204 aaKnown RBP4.51□□□□□ -1.69
CD46-213ENST00000471987 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 MMP25Q9NPA2 562 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 HINT3Q9NQE9 182 aaKnown RBP4.51□□□□□ -1.69
CD46-213ENST00000471987 C20orf141Q9NUB4 165 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 HCFC1R1Q9NWW0 138 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 HCN3Q9P1Z3 774 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 TAF1P21675 1872 aa4.51□□□□□ -1.69
CD46-213ENST00000471987 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 TUBBP07437 444 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 ZNF883P0CG24 379 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 PSMC2P35998 433 aaKnown RBP4.5□□□□□ -1.69
CD46-213ENST00000471987 EFNA5P52803 228 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 TUBB4BP68371 445 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 UBE3AQ05086 875 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 GTF2H2Q13888 395 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 RNPS1Q15287 305 aaKnown RBP4.5□□□□□ -1.69
CD46-213ENST00000471987 STXBP5Q5T5C0 1151 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 GTF2H2CQ6P1K8 395 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 ARHGAP11AQ6P4F7 1023 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 ASB18Q6ZVZ8 466 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 LRRC8DQ7L1W4 858 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 RRM2BQ7LG56 351 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 TDRPQ86YL5 185 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 OR10V1Q8NGI7 309 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 CMKLR1Q99788 373 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 MOV10L1Q9BXT6 1211 aaKnown RBP4.5□□□□□ -1.69
CD46-213ENST00000471987 HSPB7Q9UBY9 170 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 ERVK-11Q9UQG0 969 aa4.5□□□□□ -1.69
CD46-213ENST00000471987 IGKV3D-15A0A087WSY6 115 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 A0A1B0GU03 582 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 MMP14P50281 582 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.49□□□□□ -1.69
CD46-213ENST00000471987 GAGE5Q13069 117 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 GAGE6Q13070 117 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 PPIGQ13427 754 aaKnown RBP eCLIP4.49□□□□□ -1.693e-9■■□□□ 12.9
CD46-213ENST00000471987 TDGQ13569 410 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 SLC35E4Q6ICL7 350 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 SLC22A25Q6T423 547 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 NOL8Q76FK4 1167 aaKnown RBP4.49□□□□□ -1.69
CD46-213ENST00000471987 NKAPQ8N5F7 415 aaKnown RBP4.49□□□□□ -1.69
CD46-213ENST00000471987 KLHDC9Q8NEP7 349 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 LGALS12Q96DT0 336 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 LITAFQ99732 161 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 H2AFJQ9BTM1 129 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms