RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ZNF846Q147U1 533 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 CTXN3Q4LDR2 81 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 C9orf57Q5W0N0 161 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 TRMT10CQ7L0Y3 403 aaKnown RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 SPATA2LQ8IUW3 424 aaPredicted RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 SLC9A9Q8IVB4 645 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 PQLC1Q8N2U9 271 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 CCDC89Q8N998 374 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 SCAMP5Q8TAC9 235 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 HES6Q96HZ4 224 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 PWWP2AQ96N64 755 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 RILPQ96NA2 401 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 ADAMTS10Q9H324 1103 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 TRABDQ9H4I3 376 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 ERVK-5Q9HDB9 667 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 PLSCR3Q9NRY6 295 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 MTO1Q9Y2Z2 717 aaKnown RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 URB1O60287 2271 aaKnown RBP9.96□□□□□ -0.82
NUP50-214ENST00000469163 FAM25AB3EWG3 89 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 FAM25CB3EWG5 89 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 FAM25GB3EWG6 89 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
NUP50-214ENST00000469163 MED7O43513 233 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 SNAP29O95721 258 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 CD4P01730 458 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ITIH2P19823 946 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 MMP8P22894 467 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 OPRL1P41146 370 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 GPR15P49685 360 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ALDH18A1P54886 795 aaKnown RBP9.96□□□□□ -0.82
NUP50-214ENST00000469163 BPIFB3P59826 476 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 VBP1P61758 197 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 MMRN1Q13201 1228 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 SLC1A5Q15758 541 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 DCAF4L1Q3SXM0 396 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 SLC9A4Q6AI14 798 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 TXNRD3NBQ6F5E7 133 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ACAD10Q6JQN1 1059 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 PMF1Q6P1K2 205 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.82
NUP50-214ENST00000469163 FAM71AQ8IYT1 594 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ZNF786Q8N393 782 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ZCCHC7Q8N3Z6 543 aaKnown RBP9.96□□□□□ -0.82
NUP50-214ENST00000469163 ZNF565Q8N9K5 539 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ADCY4Q8NFM4 1077 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 OR6P1Q8NGX9 317 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 ZNF398Q8TD17 642 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 TP53INP1Q96A56 240 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 LIN7BQ9HAP6 207 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 GRHL1Q9NZI5 618 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 KANSL3Q9P2N6 904 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 SNX10Q9Y5X0 201 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 MICAL3Q7RTP6 2002 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 DOCK1Q14185 1865 aa9.96□□□□□ -0.82
NUP50-214ENST00000469163 PRRG1O14668 218 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 DEAF1O75398 565 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 PGRP06401 933 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 CHRNB2P17787 502 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 CD53P19397 219 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 CCNA2P20248 432 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SDC4P31431 198 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 FMO4P31512 558 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ARL4CP56559 192 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 YWHAHQ04917 246 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 CDK10Q15131 360 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 PTPN20Q4JDL3 420 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TIGD5Q53EQ6 642 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 FAM180BQ6P0A1 224 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 PLEKHG7Q6ZR37 379 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 MINDY2Q8NBR6 621 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 LMO3Q8TAP4 145 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ALG3Q92685 438 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SAMD11Q96NU1 681 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TSSK1BQ9BXA7 367 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 DCLK3Q9C098 648 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 IGFLR1Q9H665 355 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 COPS7BQ9H9Q2 264 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 SNX13Q9Y5W8 968 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ZNF98A6NK75 572 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 A8MV72 311 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 C9IYK1 514 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TRIM16O95361 564 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 IFNA16P05015 189 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 EEF1B2P24534 225 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 HNRNPH3P31942 346 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 CDH5P33151 784 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 TSPAN7P41732 249 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TKTL1P51854 596 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 AP2S1P53680 142 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 TOP3AQ13472 1001 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 CCNIQ14094 377 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ZNF124Q15973 351 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 OGFRL1Q5TC84 451 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 TTC27Q6P3X3 843 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 LYSMD3Q7Z3D4 306 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SYCE1Q8N0S2 351 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 C3orf58Q8NDZ4 430 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 FRS2Q8WU20 508 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms