RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 SMC3Q9UQE7 1217 aa5.3□□□□□ -1.56
CACNA1C-223ENST00000465278 USP16Q9Y5T5 823 aa5.3□□□□□ -1.56
CACNA1C-223ENST00000465278 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.3□□□□□ -1.56
CACNA1C-223ENST00000465278 ASXL3Q9C0F0 2248 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 ABCA2Q9BZC7 2435 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 ZNFX1Q9P2E3 1918 aaKnown RBP5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PTPRQQ9UMZ3 2332 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 KCNJ18B7U540 433 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 HOXC11O43248 304 aaPredicted RBP5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PI15O43692 258 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 USP12O75317 370 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 TBX10O75333 385 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 HOXB7P09629 217 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 FAM200BP0CF97 657 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 FCGR2AP12318 317 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 GP1BBP13224 206 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 TNNT1P13805 278 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 XBP1P17861 261 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PRKCHP24723 683 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 HNF1BP35680 557 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PGM1P36871 562 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 SLC12A2P55011 1212 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 CFHR1Q03591 330 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 TRDNQ13061 729 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 MAPK7Q13164 816 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 BYSLQ13895 437 aaKnown RBP5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 GALNT3Q14435 633 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 IL13RA2Q14627 380 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 TAF7Q15545 349 aaPredicted RBP5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 NFIL3Q16649 462 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 GXYLT1Q4G148 440 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 FBXO43Q4G163 708 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PARP10Q53GL7 1025 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 MTX3Q5HYI7 312 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 KIAA1755Q5JYT7 1200 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 COLEC12Q5KU26 742 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 ZKSCAN2Q63HK3 967 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 NAPEPLDQ6IQ20 393 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 KLHL10Q6JEL2 608 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 CYB5R4Q7L1T6 521 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 TSPYL6Q8N831 410 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PHOSPHO2Q8TCD6 241 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 HTRA1Q92743 480 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PIMREGQ9BSJ6 248 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 THUMPD2Q9BTF0 503 aaKnown RBP5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 MED4Q9NPJ6 270 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 SMC4Q9NTJ3 1288 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 TMEM45AQ9NWC5 275 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 DONSONQ9NYP3 566 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 PDP2Q9P2J9 529 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 CTNNA3Q9UI47 895 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 CD207Q9UJ71 328 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 ISY1Q9ULR0 285 aaKnown RBP5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 HSF4Q9ULV5 492 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 LAMP3Q9UQV4 416 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 AFG3L2Q9Y4W6 797 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 MICAL3Q7RTP6 2002 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 RFX7Q2KHR2 1363 aa5.29□□□□□ -1.56
CACNA1C-223ENST00000465278 TLN1Q9Y490 2541 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 TARSL2A2RTX5 802 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 SH2D7A6NKC9 451 aaPredicted RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 EPB41L2O43491 1005 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 TSPAN3O60637 253 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 IPO7O95373 1038 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 CBX6O95503 412 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 METTL18O95568 372 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 SP9P0CG40 484 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 CTSAP10619 480 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 RHAGQ02094 409 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 GOLGA8FQ08AF8 430 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 FOXD4Q12950 439 aaPredicted RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 SEMA3AQ14563 771 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 C20orf194Q5TEA3 1177 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 SYCE2Q6PIF2 218 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 MCM10Q7L590 875 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 NEK8Q86SG6 692 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 TDRD7Q8NHU6 1098 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 EXOC6Q8TAG9 804 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 WIPF2Q8TF74 440 aaPredicted RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 IGFBPL1Q8WX77 278 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 RTP3Q9BQQ7 232 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 CADM1Q9BY67 442 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 FRMD8Q9BZ67 464 aaPredicted RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 SEMA4CQ9C0C4 833 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 PRSS22Q9GZN4 317 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 MAF1Q9H063 256 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 RANBP17Q9H2T7 1088 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 MROH8Q9H579 483 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 Q9N2J8 555 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 CWC25Q9NXE8 425 aaPredicted RBP5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 MORF4L1Q9UBU8 362 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 AGTPBP1Q9UPW5 1226 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 GDAQ9Y2T3 454 aa5.28□□□□□ -1.56
CACNA1C-223ENST00000465278 MYH3P11055 1940 aa5.27□□□□□ -1.57
CACNA1C-223ENST00000465278 MYH13Q9UKX3 1938 aa5.27□□□□□ -1.57
CACNA1C-223ENST00000465278 BICDL2A1A5D9 508 aa5.27□□□□□ -1.57
CACNA1C-223ENST00000465278 TULP2O00295 520 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms