RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ARRDC2Q8TBH0 407 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 CCDC110Q8TBZ0 833 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 LRRN4Q8WUT4 740 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 KLHL32Q96NJ5 620 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 CEP41Q9BYV8 373 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 DDX47Q9H0S4 455 aaKnown RBP17.51■□□□□ 0.39
CPSF4-209ENST00000465132 LRRC40Q9H9A6 602 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 RAI2Q9Y5P3 530 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 CELSR3Q9NYQ7 3312 aa17.51■□□□□ 0.39
CPSF4-209ENST00000465132 TP53BP1Q12888 1972 aaPredicted RBP17.5■□□□□ 0.39
CPSF4-209ENST00000465132 FAM187AA6NFU0 413 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 SMAPO00193 183 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 MUSKO15146 869 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 MAT2AP31153 395 aaKnown RBP17.5■□□□□ 0.39
CPSF4-209ENST00000465132 NUDT1P36639 197 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 KCNJ1P48048 391 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 CDK16Q00536 496 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 IQCHQ86VS3 1027 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 TRIM69Q86WT6 500 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 CAMK1DQ8IU85 385 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 BBOF1Q8ND07 529 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 PDCD6IPQ8WUM4 868 aaKnown RBP17.5■□□□□ 0.39
CPSF4-209ENST00000465132 NXPE2Q96DL1 559 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 FEM1CQ96JP0 617 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 BBC3Q96PG8 261 aaPredicted RBP17.5■□□□□ 0.39
CPSF4-209ENST00000465132 RBM15Q96T37 977 aaKnown RBP eCLIP17.5■□□□□ 0.39
CPSF4-209ENST00000465132 C10orf88Q9H8K7 445 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 PHTF1Q9UMS5 762 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 DMTF1Q9Y222 760 aa17.5■□□□□ 0.39
CPSF4-209ENST00000465132 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.49■□□□□ 0.39
CPSF4-209ENST00000465132 C16orf96A6NNT2 1141 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 HTRA2O43464 458 aaPredicted RBP17.49■□□□□ 0.39
CPSF4-209ENST00000465132 CPP00450 1065 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 RGRP47804 291 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 GDF10P55107 478 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 SKOR1P84550 965 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 CDK18Q07002 472 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 CNTN1Q12860 1018 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 OVGP1Q12889 678 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 GLE1Q53GS7 698 aaKnown RBP17.49■□□□□ 0.39
CPSF4-209ENST00000465132 AGBL4Q5VU57 503 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 TTC27Q6P3X3 843 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 USP45Q70EL2 814 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 TTC7BQ86TV6 843 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 KRT12Q99456 494 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 TDRD1Q9BXT4 1180 aaKnown RBP17.49■□□□□ 0.39
CPSF4-209ENST00000465132 RAB17Q9H0T7 212 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 EIF2B3Q9NR50 452 aaKnown RBP17.49■□□□□ 0.39
CPSF4-209ENST00000465132 RAB6BQ9NRW1 208 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 ASIC3Q9UHC3 531 aa17.49■□□□□ 0.39
CPSF4-209ENST00000465132 TSPAN11A1L157 253 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 PDE2AO00408 941 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-209ENST00000465132 NEMP1O14524 444 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 MAGEC1O60732 1142 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 PMPCBO75439 489 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 PGLSO95336 258 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 CTSLP07711 333 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 CYP2A6P11509 494 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-209ENST00000465132 HLA-DPA1P20036 260 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 PSMB4P28070 264 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 CD68P34810 354 aaPredicted RBP17.48■□□□□ 0.39
CPSF4-209ENST00000465132 ADCY8P40145 1251 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 NIPAL4Q0D2K0 466 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 TARDBPQ13148 414 aaKnown RBP eCLIP17.48■□□□□ 0.39
CPSF4-209ENST00000465132 LAMB3Q13751 1172 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 PTK6Q13882 451 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 STAT4Q14765 748 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 POM121L1PQ3SYA9 428 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 HES3Q5TGS1 186 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 NEK5Q6P3R8 708 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.48■□□□□ 0.39
CPSF4-209ENST00000465132 ECHDC3Q96DC8 303 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 CRELD1Q96HD1 420 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 DCBLD2Q96PD2 775 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 KCTD5Q9NXV2 234 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 UTP11Q9Y3A2 253 aaKnown RBP17.48■□□□□ 0.39
CPSF4-209ENST00000465132 PCDHGC4Q9Y5F7 938 aa17.48■□□□□ 0.39
CPSF4-209ENST00000465132 IGSF10Q6WRI0 2623 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 PRAMEF26H0Y7S4 382 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 TRAFD1O14545 582 aaPredicted RBP17.47■□□□□ 0.39
CPSF4-209ENST00000465132 TSPAN6O43657 245 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 AP1G1O43747 822 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 PIGNO95427 931 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 NDST3O95803 873 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 FGF1P05230 155 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 ADRB3P13945 408 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 CKMT2P17540 419 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 RPL22P35268 128 aaKnown RBP17.47■□□□□ 0.39
CPSF4-209ENST00000465132 WNT3AP56704 352 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 BASP1P80723 227 aaKnown RBP17.47■□□□□ 0.39
CPSF4-209ENST00000465132 GPS1Q13098 491 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 ILKQ13418 452 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 SEMA5AQ13591 1074 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 UGP2Q16851 508 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 SETMARQ53H47 684 aaPredicted RBP17.47■□□□□ 0.39
CPSF4-209ENST00000465132 C8orf74Q6P047 294 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 TADA1Q96BN2 335 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 FRMD8Q9BZ67 464 aaPredicted RBP17.47■□□□□ 0.39
CPSF4-209ENST00000465132 NRSN2Q9GZP1 204 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms