RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 SMTNL2Q2TAL5 461 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 HSD11B1LQ7Z5J1 315 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 HSPH1Q92598 858 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 USP7Q93009 1102 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 SCRN2Q96FV2 425 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 BPIFA3Q9BQP9 254 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 ISCUQ9H1K1 167 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 SEMA6CQ9H3T2 930 aa22.75■■□□□ 1.23
USP42-205ENST00000465073 SUDS3Q9H7L9 328 aaPredicted RBP22.75■■□□□ 1.23
USP42-205ENST00000465073 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.75■■□□□ 1.23
USP42-205ENST00000465073 SMTNL1A8MU46 457 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 ETV5P41161 510 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 CDK3Q00526 305 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 TRAF2Q12933 501 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 NR1D2Q14995 579 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 ANO6Q4KMQ2 910 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 MARC1Q5VT66 337 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 ATPAF2Q8N5M1 289 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 SUFUQ9UMX1 484 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 PCDHB11Q9Y5F2 797 aa22.74■■□□□ 1.23
USP42-205ENST00000465073 NPIPB15A6NHN6 443 aaPredicted RBP22.73■■□□□ 1.23
USP42-205ENST00000465073 AGRPO00253 132 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 PGLSO95336 258 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 ITGB2P05107 769 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 LHCGRP22888 699 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 CD82P27701 267 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 ALDH4A1P30038 563 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 MMP13P45452 471 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 GPR3P46089 330 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 GNPDA1P46926 289 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 MAPK10P53779 464 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 CDH6P55285 790 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 OR1D5P58170 312 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 PIGHQ14442 188 aaPredicted RBP22.73■■□□□ 1.23
USP42-205ENST00000465073 AMZ1Q400G9 498 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 ARMC12Q5T9G4 340 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 TMEM164Q5U3C3 297 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 Q6ZVL8 140 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 USP45Q70EL2 814 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 ZFAND4Q86XD8 727 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 TEKT4Q8WW24 435 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 MCCC1Q96RQ3 725 aaPredicted RBP22.73■■□□□ 1.23
USP42-205ENST00000465073 RDH14Q9HBH5 336 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 SLC17A4Q9Y2C5 497 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 GOLGA6CA6NDK9 693 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 GOLGA6BA6NDN3 693 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 ECEL1O95672 775 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 IVLP07476 585 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 GOLGA6DP0CG33 693 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 RARAP10276 462 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 SKILP12757 684 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 KRT10P13645 584 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 TCF4P15884 667 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 SERPINB6P35237 376 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 MAXP61244 160 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 DPTQ07507 201 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 BIRC2Q13490 618 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 C16orf72Q14CZ0 275 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 MANEAQ5SRI9 462 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 RAET1GQ6H3X3 334 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 LRRC49Q8IUZ0 686 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 EXD3Q8N9H8 876 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 GOLGA6AQ9NYA3 693 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 FOXJ2Q9P0K8 574 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 PPIL1Q9Y3C6 166 aa22.73■■□□□ 1.23
USP42-205ENST00000465073 ARHGEF17Q96PE2 2063 aaPredicted RBP22.72■■□□□ 1.23
USP42-205ENST00000465073 SCN8AQ9UQD0 1980 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 C9orf172C9J069 976 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 AK4P27144 223 aaPredicted RBP22.72■■□□□ 1.23
USP42-205ENST00000465073 ADCY8P40145 1251 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 CTBSQ01459 385 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 SRSF6Q13247 344 aaKnown RBP22.72■■□□□ 1.23
USP42-205ENST00000465073 LINC00303Q3SY05 128 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 SLC30A9Q6PML9 568 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 DTX1Q86Y01 620 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 NDUFAF2Q8N183 169 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 PCDH18Q9HCL0 1135 aa22.72■■□□□ 1.23
USP42-205ENST00000465073 A0A1B0GTH6 734 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 HGSO14964 777 aaPredicted RBP22.71■■□□□ 1.23
USP42-205ENST00000465073 CD1CP29017 333 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 POLD2P49005 469 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 ZNF574Q6ZN55 896 aaPredicted RBP22.71■■□□□ 1.23
USP42-205ENST00000465073 TECPR1Q7Z6L1 1165 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 TSPAN33Q86UF1 283 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 NIPA2Q8N8Q9 360 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 ZSCAN1Q8NBB4 408 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 PTCD2Q8WV60 388 aaKnown RBP22.71■■□□□ 1.23
USP42-205ENST00000465073 PIH1D2Q8WWB5 315 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 SCARF2Q96GP6 870 aaPredicted RBP22.71■■□□□ 1.23
USP42-205ENST00000465073 NAP1L5Q96NT1 182 aaPredicted RBP22.71■■□□□ 1.23
USP42-205ENST00000465073 NUDT22Q9BRQ3 303 aa22.71■■□□□ 1.23
USP42-205ENST00000465073 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.7■■□□□ 1.22
USP42-205ENST00000465073 GPR1P46091 355 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 PTPRRQ15256 657 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 TXNRD3NBQ6F5E7 133 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 ADAMTSL4Q6UY14 1074 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 NAGSQ8N159 534 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 TEX26Q8N6G2 289 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 ARHGAP9Q9BRR9 750 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 CDH19Q9H159 772 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms