RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CEP41Q9BYV8 373 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 SLC13A1Q9BZW2 595 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 DLL3Q9NYJ7 618 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 KLQ9UEF7 1012 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 GGT7Q9UJ14 662 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 APPL1Q9UKG1 709 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 KLHL33A6NCF5 533 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 C4orf47A7E2U8 309 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 TPP1O14773 563 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 GJB3O75712 270 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 SUN1O94901 812 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 TNFP01375 233 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 IFNB1P01574 187 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 PDHA1P08559 390 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 TPSB2P20231 275 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 ADRA1AP35348 466 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 TRIM23P36406 574 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 CDH17Q12864 832 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 TPSAB1Q15661 275 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 RAET1GQ6H3X3 334 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 RANBP10Q6VN20 620 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 AVL9Q8NBF6 648 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 OR13H1Q8NG92 308 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 BRSK1Q8TDC3 778 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 OXNAD1Q96HP4 312 aaPredicted RBP10.68□□□□□ -0.7
UBR4-208ENST00000459947 BMFQ96LC9 184 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 TMEM121Q9BTD3 319 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 EBF2Q9HAK2 575 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 VPS18Q9P253 973 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 STX7O15400 261 aaKnown RBP10.68□□□□□ -0.7
UBR4-208ENST00000459947 WNT1P04628 370 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 IVLP07476 585 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 C1SP09871 688 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 LPOP22079 712 aaPredicted RBP10.68□□□□□ -0.7
UBR4-208ENST00000459947 HMGCLP35914 325 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 RSPO4Q2I0M5 234 aaPredicted RBP10.68□□□□□ -0.7
UBR4-208ENST00000459947 SIRPB2Q5JXA9 342 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 PCGF5Q86SE9 256 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 SPATA22Q8NHS9 363 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 SLCO2A1Q92959 643 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.68□□□□□ -0.72e-7■■■■■ 62.8
UBR4-208ENST00000459947 TEX101Q9BY14 249 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 ABCG8Q9H221 673 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 DGKBQ9Y6T7 804 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 H0Y8X5 98 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 KCNJ13O60928 360 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 MT-CYBP00156 380 aaPredicted RBP10.67□□□□□ -0.7
UBR4-208ENST00000459947 PCCBP05166 539 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 ATXN1LP0C7T5 689 aaKnown RBP10.67□□□□□ -0.7
UBR4-208ENST00000459947 SPAM1P38567 509 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 ID4P47928 161 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 PPARDQ03181 441 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 GALNT3Q14435 633 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 ELOCQ15369 112 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 GLT6D1Q7Z4J2 308 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 GKN2Q86XP6 184 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 PTCD2Q8WV60 388 aaKnown RBP10.67□□□□□ -0.7
UBR4-208ENST00000459947 RANBP9Q96S59 729 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 ENC1O14682 589 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 CSF2P04141 144 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 SLC2A4P14672 509 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 LHCGRP22888 699 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 COILP38432 576 aaPredicted RBP10.67□□□□□ -0.7
UBR4-208ENST00000459947 RPIAP49247 311 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 PDE1CQ14123 709 aaPredicted RBP10.67□□□□□ -0.7
UBR4-208ENST00000459947 LRRC73Q5JTD7 316 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 TCEAL6Q6IPX3 200 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 DBX2Q6ZNG2 339 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 HSD11B1LQ7Z5J1 315 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 TCEAL3Q969E4 200 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 TTC1Q99614 292 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 TTC24A2A3L6 582 aaPredicted RBP10.67□□□□□ -0.7
UBR4-208ENST00000459947 ECEL1O95672 775 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 CEACAM1P13688 526 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 PPARGP37231 505 aaPredicted RBP10.67□□□□□ -0.7
UBR4-208ENST00000459947 NPY2RP49146 381 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 BNC1Q01954 994 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 GTF2H3Q13889 308 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 KCTD11Q693B1 232 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 PHACTR4Q8IZ21 702 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 PRELID2Q8N945 189 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 OR6C4Q8NGE1 309 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 ATG4AQ8WYN0 398 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 HIC2Q96JB3 615 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 NSMCE3Q96MG7 304 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 VPS35Q96QK1 796 aa10.67□□□□□ -0.7
UBR4-208ENST00000459947 TCRBV7S2A1N4TA0A589 114 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 CDX4O14627 284 aaPredicted RBP10.66□□□□□ -0.7
UBR4-208ENST00000459947 RAD51BO15315 384 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 ZW10O43264 779 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 TRIM16O95361 564 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 CCDC6Q16204 474 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 UAP1L1Q3KQV9 507 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 LYSMD3Q7Z3D4 306 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 NAXDQ8IW45 347 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 TTC30BQ8N4P2 665 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 BBOF1Q8ND07 529 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 FZD3Q9NPG1 666 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 ILKQ13418 452 aa10.66□□□□□ -0.7
UBR4-208ENST00000459947 SNX1Q13596 522 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms