RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DDX50Q9BQ39 737 aaKnown RBP16.66■□□□□ 0.26
CCDC43-202ENST00000457422 ERVK-6Q9BXR3 956 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 RNF38Q9H0F5 515 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 TFB2MQ9H5Q4 396 aaKnown RBP16.66■□□□□ 0.26
CCDC43-202ENST00000457422 EFCAB1Q9HAE3 211 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 TRAF6Q9Y4K3 522 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 C2orf78A6NCI8 922 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 CBX4O00257 560 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 UBFD1O14562 309 aaKnown RBP16.66■□□□□ 0.26
CCDC43-202ENST00000457422 BAG2O95816 211 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 SOD2P04179 222 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 PPP3CCP48454 512 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 KLC1Q07866 573 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 SQLEQ14534 574 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 UNC50Q53HI1 259 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 PIGGQ5H8A4 983 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 CXorf57Q6NSI4 855 aaKnown RBP16.66■□□□□ 0.26
CCDC43-202ENST00000457422 BNC2Q6ZN30 1099 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-202ENST00000457422 MDGA1Q8NFP4 955 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 LPGAT1Q92604 370 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 EXT2Q93063 718 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 RMDN1Q96DB5 314 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 DEFB118Q96PH6 123 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 SMIM14Q96QK8 99 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 C2orf81A6NN90 581 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 SMNDC1O75940 238 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC43-202ENST00000457422 LATS1O95835 1130 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 ARSAP15289 507 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 RNF219Q5W0B1 726 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-202ENST00000457422 FAM219BQ5XKK7 198 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 RNF111Q6ZNA4 994 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 OR4K2Q8NGD2 314 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 ATOH8Q96SQ7 321 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 SYTL2Q9HCH5 934 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 UTP6Q9NYH9 597 aaKnown RBP16.65■□□□□ 0.26
CCDC43-202ENST00000457422 SUPT7LO94864 414 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 ALDH1A3P47895 512 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 ARF5P84085 180 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 PDAP1Q13442 181 aaKnown RBP16.65■□□□□ 0.26
CCDC43-202ENST00000457422 MAPRE2Q15555 327 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 TAF12Q16514 161 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF423Q2M1K9 1284 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 ANKRD33Q7Z3H0 272 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-202ENST00000457422 MUC3BQ9H195 1237 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-202ENST00000457422 GEMIN8Q9NWZ8 242 aaKnown RBP16.65■□□□□ 0.26
CCDC43-202ENST00000457422 MED16Q9Y2X0 877 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 TRIM17Q9Y577 477 aa16.65■□□□□ 0.26
CCDC43-202ENST00000457422 H3BMM5 538 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 UBDO15205 165 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 CD160O95971 181 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 PDHA1P08559 390 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 MTHFD2P13995 350 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 PTK2BQ14289 1009 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 OR4D1Q15615 310 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 CYHR1Q6ZMK1 362 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 HERC6Q8IVU3 1022 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 LPCAT1Q8NF37 534 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 MIEF2Q96C03 454 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 CDRT15Q96T59 188 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 ECSITQ9BQ95 431 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 DERL2Q9GZP9 239 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 WDR41Q9HAD4 459 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 SMPD4Q9NXE4 827 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 TAS2R13Q9NYV9 303 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 PACSIN3Q9UKS6 424 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 VPS9D1Q9Y2B5 631 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 RAI2Q9Y5P3 530 aa16.64■□□□□ 0.25
CCDC43-202ENST00000457422 UBA6A0AVT1 1052 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 EIF4E1BA6NMX2 242 aaKnown RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 H3BNX3 289 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 SCAMP3O14828 347 aaKnown RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 FGF4P08620 206 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 TSPAN8P19075 237 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 CD9P21926 228 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 LPOP22079 712 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 THOP1P52888 689 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 CDC16Q13042 620 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ART3Q13508 389 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 VEPH1Q14D04 833 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 EML3Q32P44 896 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 SETMARQ53H47 684 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 IZUMO2Q6UXV1 221 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 RAB44Q7Z6P3 723 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 CLYBLQ8N0X4 340 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 PTGR2Q8N8N7 351 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 HIPK4Q8NE63 616 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 HMGCLL1Q8TB92 370 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 KIAA1191Q96A73 305 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ZBED2Q9BTP6 218 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ADGRE3Q9BY15 652 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ZDHHC7Q9NXF8 308 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 PCDHGC4Q9Y5F7 938 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 OBSL1O75147 1896 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 CCDC189A1A4V9 331 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 A6NHS1 94 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ANKRD66B4E2M5 251 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 CASQ2O14958 399 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms