RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 HSPA14Q0VDF9 509 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 RCAN2Q14206 197 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 NAB2Q15742 525 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCSAPQ6IQ19 270 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 FOXR2Q6PJQ5 311 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CEACAM20Q6UY09 585 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SYT10Q6XYQ8 523 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 DCAF4L2Q8NA75 395 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 BORCS6Q96GS4 357 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 KATNBL1Q9H079 304 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SUV39H2Q9H5I1 410 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 DUSP12Q9UNI6 340 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 BRWD1Q9NSI6 2320 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PPP1R3GB7ZBB8 358 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 GTPBP1O00178 669 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PROSCO94903 275 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RHOXF2BP0C7M4 288 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ENGP17813 658 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PLOD1Q02809 727 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC35G1Q2M3R5 365 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SGO1Q5FBB7 561 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RFX8Q6ZV50 586 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RASSF3Q86WH2 238 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARFGAP2Q8N6H7 521 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCDC185Q8N715 623 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC35G2Q8TBE7 412 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 STMN2Q93045 179 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RHOXF2Q9BQY4 288 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RNF32Q9H0A6 362 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 POLR1DQ9Y2S0 133 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR5K4A6NMS3 321 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 GOLGA8MH3BSY2 632 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CYP11A1P05108 521 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ALOX5P09917 674 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PREPP48147 710 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 NR2C2P49116 596 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCNHP51946 323 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 C22orf39Q6P5X5 142 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 DAW1Q8N136 415 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 KRT78Q8N1N4 520 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 BRSK1Q8TDC3 778 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CA5BP1Q8WTZ4 195 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 NKD1Q969G9 470 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 NUS1Q96E22 293 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SPATA9Q9BWV2 254 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CWH43Q9H720 699 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PALMDQ9NP74 551 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PNMA8BQ9ULN7 279 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ATP8A1Q9Y2Q0 1164 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CPNE6O95741 557 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 STAU1O95793 577 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 MT-ND3P03897 115 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CD86P42081 329 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARSEP51690 589 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CDH15P55291 814 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CDH17Q12864 832 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 TMEM207Q6UWW9 146 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RAB11FIP2Q7L804 512 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RTN4RL1Q86UN2 441 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 FBXO15Q8NCQ5 510 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ATP6V1C2Q8NEY4 427 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PJA1Q8NG27 643 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 FGF11Q92914 225 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ASB16Q96NS5 453 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 B4GALT7Q9UBV7 327 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CAPN11Q9UMQ6 739 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 LY75O60449 1722 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 MCM3APO60318 1980 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCDC188H7C350 402 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 DCLK1O15075 740 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PSTPIP1O43586 416 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SMNDC1O75940 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 TFPIP10646 304 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 HNF1AP20823 631 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RAD23BP54727 409 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ENPEPQ07075 957 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAPQ12884 760 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ERV3-1Q14264 604 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNHIT3Q15649 155 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 STK32CQ86UX6 486 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 WDR36Q8NI36 951 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 C9orf43Q8TAL5 461 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 KLHL6Q8WZ60 621 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SYN2Q92777 582 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 KAT5Q92993 513 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 NGBQ9NPG2 151 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 AHSPQ9NZD4 102 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CLEC1BQ9P126 229 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCDC160A6NGH7 325 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF8P17098 575 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 HNRNPA2B1P22626 353 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ITGA8P53708 1063 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PLTPP55058 493 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 OVGP1Q12889 678 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ANKRD20A2Q5SQ80 823 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ANKRD20A3Q5VUR7 823 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 GFRALQ6UXV0 394 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 WDR53Q7Z5U6 358 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 TMEM25Q86YD3 366 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 UBE2J2Q8N2K1 259 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms