RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 MSH3P20585 1137 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 ZNF135P52742 658 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 CDH13P55290 713 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 SLC18A2Q05940 514 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 UPP1Q16831 310 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 SETMARQ53H47 684 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 PCDH20Q8N6Y1 951 aaKnown RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 OR52K2Q8NGK3 314 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 OR10T2Q8NGX3 314 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 PRR11Q96HE9 360 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 RBBP8Q99708 897 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 MFSD1Q9H3U5 465 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 FBXO10Q9UK96 956 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 CARNS1A5YM72 827 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 TRPC5OSA6NMA1 111 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 MGEA5O60502 916 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 CLDN11O75508 207 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 NELFEP18615 380 aaKnown RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 MAPK10P53779 464 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 GALNTL6Q49A17 601 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 BNC2Q6ZN30 1099 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 ARHGAP36Q6ZRI8 547 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 LPCAT2Q7L5N7 544 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 OR6Y1Q8NGX8 325 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 SDCCAG3Q96C92 435 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 HMCESQ96FZ2 354 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 C7orf26Q96N11 449 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 GATA5Q9BWX5 397 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 ATP13A3Q9H7F0 1226 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 CAAP1Q9H8G2 361 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 RABL2AQ9UBK7 228 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 MTMR11A4FU01 709 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 INPP4BO15327 924 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 IRAK2O43187 625 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 RFPL1O75677 317 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 MYO1DO94832 1006 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 SERPINA6P08185 405 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 RBP1P09455 135 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 PTPN2P17706 415 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 PKN3Q6P5Z2 889 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 GRASPQ7Z6J2 395 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 ULK2Q8IYT8 1036 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 ZNF781Q8N8C0 355 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 KYQ8NBH2 561 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 EME1Q96AY2 570 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 SLC9A7Q96T83 725 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 OSBPL10Q9BXB5 764 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 PRKD2Q9BZL6 878 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 RHOJQ9H4E5 214 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 IGSF9Q9P2J2 1179 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 PCDHGB4Q9UN71 923 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 MBLAC1A4D2B0 266 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 BTN3A1O00481 513 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 PRKCHP24723 683 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 NRIP1P48552 1158 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 ARL4DP49703 201 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 LIMK2P53671 638 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 POLR2LP62875 67 aaKnown RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 GNA12Q03113 381 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 IRF5Q13568 498 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 MAPRE2Q15555 327 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 PTPRNQ16849 979 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 TRIM16LQ309B1 348 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 FBXO48Q5FWF7 155 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 RTP2Q5QGT7 225 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 FAM151BQ6UXP7 276 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 SYTL1Q8IYJ3 562 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 TTC9BQ8N6N2 239 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 ZNF461Q8TAF7 563 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 SH3RF2Q8TEC5 729 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 GDPD5Q8WTR4 605 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 IGSF21Q96ID5 467 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 FBXO9Q9UK97 447 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 BHMG1C9JSJ3 638 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 EPB42P16452 691 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 ZNF7P17097 686 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 TFEBP19484 476 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 IGFBP6P24592 240 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 CRABP2P29373 138 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 RAB10P61026 200 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 PLCL1Q15111 1095 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 USP45Q70EL2 814 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 TMEM159Q96B96 161 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 MED8Q96G25 268 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 MRPL46Q9H2W6 279 aaKnown RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 TAS2R13Q9NYV9 303 aa10.59□□□□□ -0.71
TOP3B-210ENST00000444502 STX18Q9P2W9 335 aaKnown RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 HECAQ9UBI9 543 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-210ENST00000444502 SCAMP1O15126 338 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 UBDO15205 165 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 TGDSO95455 350 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 AIF1P55008 147 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 CDC16Q13042 620 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 ATXN7L2Q5T6C5 722 aaPredicted RBP10.58□□□□□ -0.71
TOP3B-210ENST00000444502 CGB2Q6NT52 195 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 UGT3A1Q6NUS8 523 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 ASRGL1Q7L266 308 aa10.58□□□□□ -0.71
TOP3B-210ENST00000444502 DSG4Q86SJ6 1040 aa10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms