RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 BMP2P12643 396 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 CYP4B1P13584 511 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 MYF6P23409 242 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 HMGB2P26583 209 aaKnown RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 CLK1P49759 484 aaKnown RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 APLP1P51693 650 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 IST1P53990 364 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 BNIP2Q12982 314 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 LAPTM5Q13571 262 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 GTF2H3Q13889 308 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 RNF19BQ6ZMZ0 732 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 PRR23BQ6ZRT6 265 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 GIPC2Q8TF65 315 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 TOP1MTQ969P6 601 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 HOPXQ9BPY8 73 aaPredicted RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 EPS8L2Q9H6S3 715 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 INIPQ9NRY2 104 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 USP22Q9UPT9 525 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 SLC27A5Q9Y2P5 690 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 NUP205Q92621 2012 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 SCN9AQ15858 1988 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 LINC00854A0A1B0GVQ3 168 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 HTR3EA5X5Y0 456 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 RHOBTB1O94844 696 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 CAPN3P20807 821 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 MTPNP58546 118 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 NRG1Q02297 640 aaPredicted RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 TNK2Q07912 1038 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 GLYATQ6IB77 296 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 NIPAL1Q6NVV3 410 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 BNIPLQ7Z465 357 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 R3HCC1LQ7Z5L2 792 aaKnown RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 IGFN1Q86VF2 1251 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 LZTR1Q8N653 840 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.05□□□□□ -0.96
COPB1-202ENST00000439561 TEPSINQ96N21 525 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 NSUN5Q96P11 429 aaKnown RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 KLHL5Q96PQ7 755 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 OLFM1Q99784 485 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 COLEC11Q9BWP8 271 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 SP110Q9HB58 689 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 PALMDQ9NP74 551 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 MPP6Q9NZW5 540 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 EVLQ9UI08 416 aaPredicted RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 LOXHD1Q8IVV2 1947 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 IGKV6D-21A0A0A0MT36 114 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 H3BRB1 525 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 TRIM24O15164 1050 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 KPNA6O60684 536 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ADAM23O75077 832 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 KATNA1O75449 491 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 SERPINB7O75635 380 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 C22orf31O95567 290 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CD4P01730 458 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 OPRL1P41146 370 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 SERPINB10P48595 397 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 WNT3AP56704 352 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CTBSQ01459 385 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 PAFAH1B3Q15102 231 aaKnown RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 INAQ16352 499 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 MEP1AQ16819 746 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 SV2CQ496J9 727 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 FAM98BQ52LJ0 330 aaKnown RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 TSTD2Q5T7W7 516 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 PLPPR4Q7Z2D5 763 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CCDC103Q8IW40 242 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 SCN4BQ8IWT1 228 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 ACDQ96AP0 544 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 VAT1Q99536 393 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ELP3Q9H9T3 547 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 SMURF2Q9HAU4 748 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 GNPTGQ9UJJ9 305 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 PTBP2Q9UKA9 531 aaKnown RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 PSME2Q9UL46 239 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 TCAF1Q9Y4C2 921 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 KRBA1A5PL33 1030 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 AQP12BA6NM10 295 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 H0YJX3 145 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 THRBP10828 461 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CD86P42081 329 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 MTHFRP42898 656 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 NKX2-5P52952 324 aaPredicted RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 ZNF846Q147U1 533 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 PSMD5Q16401 504 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 NOTUMQ6P988 496 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 GALNT5Q7Z7M9 940 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 EPHX4Q8IUS5 362 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 AQP12AQ8IXF9 295 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 FAM126BQ8IXS8 530 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 TBC1D21Q8IYX1 336 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 FBXO39Q8N4B4 442 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ZNF420Q8TAQ5 688 aaPredicted RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 HASPINQ8TF76 798 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 RAB2BQ8WUD1 216 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ANKRD49Q8WVL7 239 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 RORBQ92753 470 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ROPN1LQ96C74 230 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 C1QTNF1Q9BXJ1 281 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 DUSP16Q9BY84 665 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms