RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CREB5Q02930 508 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MTAPQ13126 283 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 FAM187BQ17R55 369 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 TEX44Q53QW1 395 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 C9orf64Q5T6V5 341 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 TYW3Q6IPR3 259 aaKnown RBP12.09□□□□□ -0.47
NEK1-201ENST00000439128 GDPD4Q6W3E5 623 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 CCT8L2Q96SF2 557 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 GMLQ99445 158 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 SEMA4AQ9H3S1 761 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 MAPRE3Q9UPY8 281 aa12.09□□□□□ -0.47
NEK1-201ENST00000439128 OR1F1O43749 312 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 LRATO95237 230 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 KCNH1O95259 989 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 GALTP07902 379 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 HTR7P34969 479 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 SERPINB10P48595 397 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 GSSP48637 474 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 JAG1P78504 1218 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 SNX30Q5VWJ9 437 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 RTL3Q8N8U3 475 aaKnown RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 KCTD4Q8WVF5 259 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 C5orf34Q96MH7 638 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 VIPAS39Q9H9C1 493 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 C3orf14Q9HBI5 128 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 BTRCQ9Y297 605 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 PCDHB1Q9Y5F3 818 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 MT-CYBP00156 380 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 ZNF8P17098 575 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 SOWAHAQ2M3V2 549 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 LDLRAD1Q5T700 205 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 POTEHQ6S545 545 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 C17orf99Q6UX52 265 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 TMEM26Q6ZUK4 368 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 GPRIN3Q6ZVF9 776 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 POLNQ7Z5Q5 900 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 CMTM8Q8IZV2 173 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 TCP10LQ8TDR4 215 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 KREMEN1Q96MU8 473 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 LMAN2LQ9H0V9 348 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 SNX13Q9Y5W8 968 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 LTN1O94822 1766 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 YJEFN3A6XGL0 299 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 E7ENQ6 273 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 PRR23D1E9PI22 279 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 IRAK2O43187 625 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 RIPK2O43353 540 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 PRR23D2P0DMB1 279 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 HLA-EP13747 358 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 S100A5P33763 92 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 FUT2Q10981 343 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 NAE1Q13564 534 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 EPHX4Q8IUS5 362 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 IPCEF1Q8WWN9 437 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 SEC16BQ96JE7 1060 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 MCCC2Q9HCC0 563 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 DUSP12Q9UNI6 340 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 M0R3G1 203 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 PIGNO95427 931 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 EN2P19622 333 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 TARSP26639 723 aaKnown RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 BMPR1AP36894 532 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 BUD31P41223 144 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 PRKCIP41743 596 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 ATP6V0D1P61421 351 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 CCNYL2Q5T2Q4 361 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 ARHGAP17Q68EM7 881 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 ABTB1Q969K4 478 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 KLHDC7BQ96G42 594 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 CCDC177Q9NQR7 707 aaPredicted RBP12.08□□□□□ -0.48
NEK1-201ENST00000439128 FBXO5Q9UKT4 447 aa12.08□□□□□ -0.48
NEK1-201ENST00000439128 WNT9AO14904 365 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 TMED1Q13445 227 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 ADGRF1Q5T601 910 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 MLIPQ5VWP3 458 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 SLC26A9Q7LBE3 791 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 UNC5BQ8IZJ1 945 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 PYROXD2Q8N2H3 581 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 KIF2BQ8N4N8 673 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 HCAR2Q8TDS4 363 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 PPCDCQ96CD2 204 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 PTPN18Q99952 460 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 GSDMCQ9BYG8 508 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 KCNN2Q9H2S1 579 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 CCDC167Q9P0B6 97 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 DNAJB4Q9UDY4 337 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 FBXW2Q9UKT8 454 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 VPS4AQ9UN37 437 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 TLR6Q9Y2C9 796 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 LYVE1Q9Y5Y7 322 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 CCNCP24863 283 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 NCF4Q15080 339 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 LSM12Q3MHD2 195 aaKnown RBP12.07□□□□□ -0.48
NEK1-201ENST00000439128 LDLRAP1Q5SW96 308 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms