RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CDKL1Q00532 357 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MTA1Q13330 715 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 OR4D1Q15615 310 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SAMD4BQ5PRF9 694 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 C6orf10Q5SRN2 563 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FAM219BQ5XKK7 198 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SAPCD2Q86UD0 394 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PHYKPLQ8IUZ5 450 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PTGR2Q8N8N7 351 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PCSK9Q8NBP7 692 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 OR52K2Q8NGK3 314 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 OR9I1Q8NGQ6 314 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 LPGAT1Q92604 370 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ATP6V1E2Q96A05 226 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SLCO4A1Q96BD0 722 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ROPN1LQ96C74 230 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TFB2MQ9H5Q4 396 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 COMMD8Q9NX08 183 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PLK2Q9NYY3 685 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 NDUFA13Q9P0J0 144 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CROTQ9UKG9 612 aa16.07■□□□□ 0.16
HLA-DQB2-231ENST00000435145 BBIP1A8MTZ0 92 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 H3BMM5 538 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 VNN2O95498 520 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 NDST3O95803 873 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TSPAN8P19075 237 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 HOXD9P28356 352 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PTPRCAPQ14761 206 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MGAT5BQ3V5L5 792 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 KANK2Q63ZY3 851 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 OR13C4Q8NGS5 318 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 BLOC1S5Q8TDH9 187 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MGME1Q9BQP7 344 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GPATCH1Q9BRR8 931 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 AKTIPQ9H8T0 292 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FBRSL1Q9HCM7 1045 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CATSPERZQ9NTU4 200 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 AP4S1Q9Y587 144 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TRPA1O75762 1119 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SOAT2O75908 522 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SLC4A1P02730 911 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TACR2P21452 398 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ZNF140P52738 457 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ZNF235Q14590 738 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 OR4L1Q8NH43 312 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PRICKLE1Q96MT3 831 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CYP2S1Q96SQ9 504 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TRIM4Q9C037 500 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CRISPLD1Q9H336 500 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 INTS10Q9NVR2 710 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PCDHGB4Q9UN71 923 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MED16Q9Y2X0 877 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PCDHGB5Q9Y5G0 923 aa16.06■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CHD5Q8TDI0 1954 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ATP6AP2A0A1C7CYW4 349 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MTMR11A4FU01 709 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FAM155AB1AL88 458 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 UBXN8O00124 270 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CA12O43570 354 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ATP6AP2O75787 350 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SRP72O76094 671 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 HMBSP08397 361 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FGFR3P22607 806 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SLC7A1P30825 629 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CDH13P55290 713 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MYBPC1Q00872 1141 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 RALGDSQ12967 914 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GALNT3Q14435 633 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SETMARQ53H47 684 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 RETREG3Q86VR2 466 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 NAT14Q8WUY8 206 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CDKN2AIPNLQ96HQ2 116 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SH3GL3Q99963 347 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 RETREG1Q9H6L5 497 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 NLE1Q9NVX2 485 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GREB1Q4ZG55 1949 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 AZIN1O14977 448 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TBC1D4O60343 1298 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SIX3O95343 332 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TFAP2AP05549 437 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SERPINF2P08697 491 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 KPNA1P52294 538 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 STX1BP61266 288 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PRKCZQ05513 592 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 RAB44Q7Z6P3 723 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SNX31Q8N9S9 440 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 KIAA1191Q96A73 305 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ZNF597Q96LX8 424 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 NSMCE3Q96MG7 304 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 DERL2Q9GZP9 239 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ABCD2Q9UBJ2 740 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 COMMD3-BMI1R4GMX3 469 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ANKRD36A6QL64 1941 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PPP6CO00743 305 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 KERAO60938 352 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TNFAIP8O95379 198 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 433.6 ms