RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 NECTIN4Q96NY8 510 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 NODALQ96S42 347 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF717Q9BY31 904 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 CMTM6Q9NX76 183 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 KLHL8Q9P2G9 620 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 ANAPC2Q9UJX6 822 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 A0A0J9YYE9 177 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 A0A1B0GW55 424 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 CENPBD1B2RD01 187 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 H3BMM5 538 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 TFECO14948 347 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 LRIG2O94898 1065 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DUX4L2P0CJ85 424 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DUX4L3P0CJ86 424 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DUX4L4P0CJ87 422 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DUX4L5P0CJ88 424 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DUX4L6P0CJ89 424 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DUX4L7P0CJ90 424 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 TCF3P15923 654 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 SDC4P31431 198 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 EPS8Q12929 822 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 LAPTM5Q13571 262 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 SQLEQ14534 574 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 HIST2H2ACQ16777 129 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 STEAP4Q687X5 459 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 SDE2Q6IQ49 451 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 KCNMB4Q86W47 210 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 LYSMD2Q8IV50 215 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 COLGALT2Q8IYK4 626 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 RDH11Q8TC12 318 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 KCTD14Q9BQ13 255 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 FEM1AQ9BSK4 669 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 SLC7A5P2Q9GIP4 190 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF277Q9NRM2 450 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 BFARQ9NZS9 450 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DUX4Q9UBX2 424 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 MID2Q9UJV3 735 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 MTF2Q9Y483 593 aaPredicted RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 ADAMTSL3P82987 1691 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 NHSQ6T4R5 1651 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 MPOP05164 745 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 HTR1AP08908 422 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 PRKACGP22612 351 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 HSDL1Q3SXM5 330 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 TTC39CQ8N584 583 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 HCAR2Q8TDS4 363 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 DOT1LQ8TEK3 1739 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 RORBQ92753 470 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 PROX1Q92786 737 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 NACC2Q96BF6 587 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 RPRD1BQ9NQG5 326 aaKnown RBP7.46□□□□□ -1.22
CPSF6-202ENST00000435070 HPS4Q9NQG7 708 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 DTLQ9NZJ0 730 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 INVSQ9Y283 1065 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 CDK5RAP2Q96SN8 1893 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 MYL3P08590 195 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 IL12AP29459 219 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 CSHL1Q14406 222 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 ARHGEF6Q15052 776 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 TSC22D1Q15714 1073 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 BOLA3Q53S33 107 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 NEK10Q6ZWH5 1172 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 SPRED1Q7Z699 444 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 FUNDC1Q8IVP5 155 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 MYRFLQ96LU7 910 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 DSN1Q9H410 356 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 A0A0A0MRY4 1105 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 CLRN2A0PK11 232 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 ALX3O95076 343 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 THRBP10828 461 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 GOT1P17174 413 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 KCNA5P22460 613 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 ADARB1P78563 741 aaKnown RBP7.46□□□□□ -1.22
CPSF6-202ENST00000435070 TUBA3CQ13748 450 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 DUOXA2Q1HG44 320 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 C6orf141Q5SZD1 244 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 TXNDC11Q6PKC3 985 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 C12orf29Q8N999 325 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 TMEM174Q8WUU8 243 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 RTP4Q96DX8 246 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 MED30Q96HR3 178 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 MAP6Q96JE9 813 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 CEP19Q96LK0 163 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 SPATA13Q96N96 652 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 SLC30A3Q99726 388 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 NTPCRQ9BSD7 190 aaKnown RBP7.46□□□□□ -1.22
CPSF6-202ENST00000435070 ANKEF1Q9NU02 776 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 ZSCAN32Q9NX65 697 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 MAP10Q9P2G4 905 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 ACOT9Q9Y305 439 aa7.46□□□□□ -1.22
CPSF6-202ENST00000435070 FAM172BPA6NC97 362 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 C2CD4BA6NLJ0 364 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 SLC22A2O15244 555 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 SCO1O75880 301 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ENDOD1O94919 500 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 GSTM2P28161 218 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CRKP46108 304 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CLK1P49759 484 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PPP5CP53041 499 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms