RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PTPN1P18031 435 aaKnown RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 CYP2B6P20813 491 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 TYK2P29597 1187 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 CCND2P30279 289 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 HOXC12P31275 282 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SPRP35270 261 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 BCAP31P51572 246 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 EFNA5P52803 228 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 ERVK-21P61565 698 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 ESRRGP62508 458 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 CTBSQ01459 385 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 PEX6Q13608 980 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SEMA3AQ14563 771 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 ZNF699Q32M78 642 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SPATS1Q496A3 300 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 ANKRD39Q53RE8 183 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 FAM209AQ5JX71 171 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 TREML2Q5T2D2 321 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SEL1L3Q68CR1 1132 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 IQSEC1Q6DN90 963 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 KDELC1Q6UW63 502 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 NAPRTQ6XQN6 538 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 PELI3Q8N2H9 469 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 TTC39CQ8N584 583 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 TBC1D15Q8TC07 691 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 BTN2A2Q8WVV5 523 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 TRUB1Q8WWH5 349 aaKnown RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 PLD4Q96BZ4 506 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 C12orf43Q96C57 262 aaKnown RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 RIPOR3Q96MK2 946 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SPATA13Q96N96 652 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 NEURL2Q9BR09 285 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 GPATCH1Q9BRR8 931 aaKnown RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 C11orf84Q9BUA3 381 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 GATA5Q9BWX5 397 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 RNF38Q9H0F5 515 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SUV39H2Q9H5I1 410 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 RPF2Q9H7B2 306 aaKnown RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 SNX15Q9NRS6 342 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 FOXD3Q9UJU5 478 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-202ENST00000432306 KIAA1257Q9ULG3 409 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 PCDHGA7Q9Y5G6 932 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 RLFQ13129 1914 aa8.08□□□□□ -1.12
VTI1A-202ENST00000432306 MYH9P35579 1960 aaKnown RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 A0A087X0M5 115 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 A0A1B0GTW7 788 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 MYOCOSA0A1B0GUC4 107 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 A0A1B0GX30 115 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 A0A1W2PQH9 124 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 HTR3EA5X5Y0 456 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM247A6NEH6 219 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 UPK3BL1B0FP48 263 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TARM1B6A8C7 271 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 UPK3BL2E5RIL1 263 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 FBP2O00757 339 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 DLGAP1O14490 977 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 KPNA6O60684 536 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 ZMPSTE24O75844 475 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 SULT1C4O75897 302 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 VAPBO95292 243 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 ESRRBO95718 433 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 EIF2S1P05198 315 aaKnown RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 SUPT20HL2P0C7V6 817 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 COL6A2P12110 1019 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 FOSL2P15408 326 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 JUNBP17275 347 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TFEBP19484 476 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 PTPN9P43378 593 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 POLD2P49005 469 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 RPS3AP61247 264 aaKnown RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 NAA20P61599 178 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 INCA1Q0VD86 236 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 C16orf72Q14CZ0 275 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 PDK1Q15118 436 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 MAPRE2Q15555 327 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TARBP2Q15633 366 aaKnown RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 KRTCAP3Q53RY4 240 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 IL23RQ5VWK5 629 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 LIPMQ5VYY2 423 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 SCARA3Q6AZY7 606 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 GRAMD4Q6IC98 578 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 ZYG11AQ6WRX3 759 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 DPP9Q86TI2 863 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM110Q86TL2 294 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM135Q86UB9 458 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TBC1D21Q8IYX1 336 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 ZNF619Q8N2I2 560 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 DDHD1Q8NEL9 900 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 RXFP2Q8WXD0 754 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 MYLIPQ8WY64 445 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 SLCO4A1Q96BD0 722 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 RCN3Q96D15 328 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 CERS2Q96G23 380 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 PLEKHA8Q96JA3 519 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 ZNF512Q96ME7 567 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 OLFM1Q99784 485 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 CORO1BQ9BR76 489 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 EFHD1Q9BUP0 239 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 SHCBP1LQ9BZQ2 653 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms