RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 IL27RAQ6UWB1 636 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 HIST3H2AQ7L7L0 130 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 HIST1H2ACQ93077 130 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 VAT1Q99536 393 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 USP20Q9Y2K6 914 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 CRYL1Q9Y2S2 319 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
TNC-203ENST00000423613 DDX3XO00571 662 aaKnown RBP eCLIP11.12□□□□□ -0.63
TNC-203ENST00000423613 SCAMP3O14828 347 aaKnown RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 VAPBO95292 243 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 PLATP00750 562 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 DBIP07108 87 aaKnown RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 PLK1P53350 603 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 SPANXN3Q5MJ09 141 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 CNSTQ6PJW8 725 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 METTL6Q8TCB7 284 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 FATE1Q969F0 183 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 C12orf43Q96C57 262 aaKnown RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 FCRL4Q96PJ5 515 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 DUSP9Q99956 384 aaKnown RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 TLR10Q9BXR5 811 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 POLR3BQ9NW08 1133 aaPredicted RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 GJB6O95452 261 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 ITGB1P05556 798 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 DUS1LQ6P1R4 473 aaKnown RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 GCNT7Q6ZNI0 430 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 FBXO39Q8N4B4 442 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 OR2L5Q8NG80 312 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 HELQQ8TDG4 1101 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 CPNE1Q99829 537 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 GDF3Q9NR23 364 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 DNPEPQ9ULA0 475 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 TBC1D30Q9Y2I9 924 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 MTF2Q9Y483 593 aaPredicted RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 A0A096LPK6 155 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 TMEM150BA6NC51 233 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 SNX3O60493 162 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 LYNP07948 512 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 TYMPP19971 482 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 S100A3P33764 101 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 HPCAL1P37235 193 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 RARRES1P49788 294 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 PARGQ86W56 976 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 MAGEC3Q8TD91 643 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 SPATC1LQ9H0A9 340 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 GULP1Q9UBP9 304 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 ZNF69Q9UC07 566 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 AASSQ9UDR5 926 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 A0A087X0B3 334 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 ARL5CA6NH57 179 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 FAM86B1E9PN63 330 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 TBX1O43435 398 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 SLITRK3O94933 977 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 INSRRP14616 1297 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 PSEN2P49810 448 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 ZBTB6Q15916 424 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 PIK3R3Q92569 461 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 PTCD3Q96EY7 689 aaKnown RBP11.12□□□□□ -0.63
TNC-203ENST00000423613 TBCBQ99426 244 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 IL17RBQ9NRM6 502 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 ETNK2Q9NVF9 386 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 CAPN8A6NHC0 703 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 CLDN25C9JDP6 229 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 AURKAO14965 403 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 UGT2B15P54855 530 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 RPA4Q13156 261 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 ZNF470Q6ECI4 717 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 RAB21Q9UL25 225 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 ENTPD4Q9Y227 616 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 TRPV2Q9Y5S1 764 aa11.12□□□□□ -0.63
TNC-203ENST00000423613 C12orf71A8MTZ7 269 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 RAMP2O60895 175 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 YES1P07947 543 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 ANXA5P08758 320 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 STOMP27105 288 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 MSX2P35548 267 aaPredicted RBP11.11□□□□□ -0.63
TNC-203ENST00000423613 SYT12Q8IV01 421 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 NRSN1Q8IZ57 195 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 ZNF433Q8N7K0 673 aaPredicted RBP11.11□□□□□ -0.63
TNC-203ENST00000423613 GSTCDQ8NEC7 633 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 ADAM32Q8TC27 787 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 SLC35C1Q96A29 364 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 TMED5Q9Y3A6 229 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 RGS14O43566 566 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 SHBGP04278 402 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 CRABP2P29373 138 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
TNC-203ENST00000423613 BLMHQ13867 455 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 MILR1Q7Z6M3 343 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 SCUBE3Q8IX30 993 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
TNC-203ENST00000423613 ELMOD2Q8IZ81 293 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms