RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RTP4Q96DX8 246 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 CAPZA3Q96KX2 299 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 TBL1YQ9BQ87 522 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 ERVMER34-1Q9H9K5 563 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 KCND1Q9NSA2 647 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 DNAJC28Q9NX36 388 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 TTC7AQ9ULT0 858 aaPredicted RBP15.74■□□□□ 0.11
BRAT1-202ENST00000421712 ZNF711Q9Y462 761 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 SAR1BQ9Y6B6 198 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 TMEM131Q92545 1883 aa15.74■□□□□ 0.11
BRAT1-202ENST00000421712 A0A1B0GTQ1 180 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 CACNB4O00305 520 aaPredicted RBP15.73■□□□□ 0.11
BRAT1-202ENST00000421712 TOR1BO14657 336 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 USP12O75317 370 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 FGF1P05230 155 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 ATXN1LP0C7T5 689 aaKnown RBP15.73■□□□□ 0.11
BRAT1-202ENST00000421712 ZSCAN5DPP0CG00 497 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 KCNA4P22459 653 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 CASQ1P31415 396 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 GPR1P46091 355 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 OLIG2Q13516 323 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 ESRP1Q6NXG1 681 aaKnown RBP15.73■□□□□ 0.11
BRAT1-202ENST00000421712 ENPP7Q6UWV6 458 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 TECPR1Q7Z6L1 1165 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 NRSN1Q8IZ57 195 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 SLC22A18ASQ8N1D0 253 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 PDCD7Q8N8D1 485 aaKnown RBP15.73■□□□□ 0.11
BRAT1-202ENST00000421712 ATL2Q8NHH9 583 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 GORASP1Q9BQQ3 440 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 RTKNQ9BST9 563 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 ABCG8Q9H221 673 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 ETNK1Q9HBU6 452 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 RAB6BQ9NRW1 208 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 PAK5Q9P286 719 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 SPO11Q9Y5K1 396 aa15.73■□□□□ 0.11
BRAT1-202ENST00000421712 TDRD6O60522 2096 aaKnown RBP15.72■□□□□ 0.11
BRAT1-202ENST00000421712 SPTY2D1-AS1A0A0U1RR47 76 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 YKT6O15498 198 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 ZNF883P0CG24 379 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 TSHRP16473 764 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 FDFT1P37268 417 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 ID4P47928 161 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 SPINT3P49223 89 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 SLC14A1Q13336 389 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 FZD2Q14332 565 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 CDKN3Q16667 212 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 PAPD7Q5XG87 772 aaKnown RBP15.72■□□□□ 0.11
BRAT1-202ENST00000421712 RANBP10Q6VN20 620 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 RD3Q7Z3Z2 195 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 GLT6D1Q7Z4J2 308 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 TMC3Q7Z5M5 1100 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 PARGQ86W56 976 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 SCAMP4Q969E2 229 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 RIOK2Q9BVS4 552 aaKnown RBP15.72■□□□□ 0.11
BRAT1-202ENST00000421712 FAM83DQ9H4H8 585 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 TRABDQ9H4I3 376 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 WDR26Q9H7D7 661 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 LRRC40Q9H9A6 602 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 BPIFA1Q9NP55 256 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 PHPT1Q9NRX4 125 aaPredicted RBP15.72■□□□□ 0.11
BRAT1-202ENST00000421712 HACD3Q9P035 362 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 MOSPD1Q9UJG1 213 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 CFAP54Q96N23 3096 aa15.72■□□□□ 0.11
BRAT1-202ENST00000421712 TP53BP1Q12888 1972 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-202ENST00000421712 CABIN1Q9Y6J0 2220 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 DCDC2BA2VCK2 349 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 RGSL1A5PLK6 1076 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 H3BM21 787 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 K7ESM1 405 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 PDE2AO00408 941 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-202ENST00000421712 AURKAO14965 403 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 SDC3O75056 442 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 JUNDP17535 347 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 RPL22P35268 128 aaKnown RBP15.71■□□□□ 0.11
BRAT1-202ENST00000421712 ADRA1AP35348 466 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 COILP38432 576 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-202ENST00000421712 PAFAH1B1P43034 410 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 RXRGP48443 463 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 BNIP3Q12983 259 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 PUM1Q14671 1186 aaKnown RBP eCLIP15.71■□□□□ 0.11
BRAT1-202ENST00000421712 NFATC4Q14934 902 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 TRIP13Q15645 432 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-202ENST00000421712 ALS2CLQ60I27 953 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 C4orf22Q6V702 233 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 PPP1R21Q6ZMI0 780 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 GATAD2AQ86YP4 633 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 PELI3Q8N2H9 469 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 GLIS1Q8NBF1 620 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 SLC32A1Q9H598 525 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 RAD18Q9NS91 495 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 PKP3Q9Y446 797 aa15.71■□□□□ 0.11
BRAT1-202ENST00000421712 ASCC3Q8N3C0 2202 aaKnown RBP15.71■□□□□ 0.1
BRAT1-202ENST00000421712 ZNF292O60281 2723 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 SH3BP5O60239 455 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 PHF2O75151 1096 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 AP2A1O95782 977 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 GAS8O95995 478 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 PYGLP06737 847 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 CD59P13987 128 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms