RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 VIPR1P32241 457 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 SSR2P43308 183 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 FAAP100Q0VG06 881 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 CCDC153Q494R4 210 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 FAXDC2Q96IV6 333 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 PRICKLE1Q96MT3 831 aaPredicted RBP16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 FAM111AQ96PZ2 611 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 CPXM1Q96SM3 734 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 CYP2S1Q96SQ9 504 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 C10orf88Q9H8K7 445 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 GDE1Q9NZC3 331 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 MAPRE3Q9UPY8 281 aa16.93■□□□□ 0.3
SYNGAP1-202ENST00000418600 PRAMEF1O95521 474 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 CPA3P15088 417 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 DSC2Q02487 901 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 HHIPQ96QV1 700 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 FBRSQ9HAH7 460 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 KLC4Q9NSK0 619 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 FBXW11Q9UKB1 542 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 PCDHGC4Q9Y5F7 938 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 LTA4HP09960 611 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 VIPR2P41587 438 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 RPS24P62847 133 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 CNGA3Q16281 694 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 GATAD2AQ86YP4 633 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 LINGO1Q96FE5 620 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 ADI1Q9BV57 179 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.92■□□□□ 0.32e-6■■■□□ 17.6
SYNGAP1-202ENST00000418600 PRKAB1Q9Y478 270 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 MYO1CO00159 1063 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 RFXAPO00287 272 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 MMP20O60882 483 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 ERAL1O75616 437 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 RPS21P63220 83 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 CYP4F2P78329 520 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 MLIPQ5VWP3 458 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 ADAMTSL2Q86TH1 951 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 OR4K2Q8NGD2 314 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 ZCCHC10Q8TBK6 192 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 SLC22A18Q96BI1 424 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 GNEQ9Y223 722 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 CHADO15335 359 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 L1CAMP32004 1257 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 RPL3P39023 403 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 DEFA1P59665 94 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 DEFA3P59666 94 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 GPR156Q8NFN8 814 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 UHRF1Q96T88 793 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 KCNN2Q9H2S1 579 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 CAAP1Q9H8G2 361 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 SEMA4BQ9NPR2 832 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 ATG7O95352 703 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 PWP1Q13610 501 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 NFYCQ13952 458 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 NETO2Q8NC67 525 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 RERGLQ9H628 205 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 ALG9Q9H6U8 611 aa16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 MTO1Q9Y2Z2 717 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-202ENST00000418600 C5orf60A6NFR6 353 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 MAGEA9P43362 315 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 P3H2Q8IVL5 708 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 CLP1Q92989 425 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 PCBD2Q9H0N5 130 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 MRPS30Q9NP92 439 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 OSER1Q9NX31 292 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 ZNF229Q9UJW7 825 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 SNX10Q9Y5X0 201 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 MT-CYBP00156 380 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 PTPN20Q4JDL3 420 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 TCAIMQ8N3R3 496 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 FAM98AQ8NCA5 519 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 JOSD2Q8TAC2 188 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 HDAC10Q969S8 669 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 ASB2Q96Q27 587 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 BRINP2Q9C0B6 783 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 ISCUQ9H1K1 167 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 PCDH18Q9HCL0 1135 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 ARHGAP20Q9P2F6 1191 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 SERTAD3Q9UJW9 196 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 AIM2O14862 343 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 TFPIP10646 304 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 CCNFP41002 786 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 LAPTM5Q13571 262 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 GPAT3Q53EU6 434 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 VN1R5Q7Z5H4 357 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 LDAHQ9H6V9 325 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 NEUROD4Q9HD90 331 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 PCDHGC3Q9UN70 934 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 DNALI1O14645 258 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 SIAH1Q8IUQ4 282 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 ZNF563Q8TA94 476 aa16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 CCDC177Q9NQR7 707 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-202ENST00000418600 USP27XA6NNY8 438 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 NR5A2O00482 541 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 RNGTTO60942 597 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 EPORP19235 508 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms