RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 LGI2Q8N0V4 545 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 PCYOX1LQ8NBM8 494 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 TRIB3Q96RU7 358 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 CDK5RAP1Q96SZ6 601 aaKnown RBP23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 NLE1Q9NVX2 485 aaPredicted RBP23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 TMEM181Q9P2C4 612 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 SEPT3Q9UH03 358 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 SLC27A5Q9Y2P5 690 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 MTF2Q9Y483 593 aaPredicted RBP23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 AP4S1Q9Y587 144 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 AP4B1Q9Y6B7 739 aa23.07■■□□□ 1.28
RABGGTA-202ENST00000399409 SOAT2O75908 522 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 POLE2P56282 527 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 SEMA3AQ14563 771 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 THEMIS2Q5TEJ8 643 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 FAM156AQ8NDB6 213 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 OR13C4Q8NGS5 318 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 SEPT5Q99719 369 aaPredicted RBP23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 MGME1Q9BQP7 344 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 SMIM31A0A1B0GVY4 71 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 AZIN1O14977 448 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 RNASEH2AO75792 299 aaKnown RBP23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 GPX3P22352 226 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 NAA20P61599 178 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 SH3BP2P78314 561 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 IRAK1BP1Q5VVH5 260 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 CWF19L1Q69YN2 538 aaKnown RBP23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 RYBPQ8N488 228 aaPredicted RBP23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 SH3RF2Q8TEC5 729 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 C2orf15Q8WU43 125 aaKnown RBP23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 CDKN2AIPNLQ96HQ2 116 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 EPB41L1Q9H4G0 881 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 SLC4A7Q9Y6M7 1214 aa23.06■■□□□ 1.28
RABGGTA-202ENST00000399409 VWA8A3KMH1 1905 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 TLR5O60602 858 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 GJB3O75712 270 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 CDK14O94921 469 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 STAMBPO95630 424 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 ARSAP15289 507 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 ATXN3P54252 364 aaPredicted RBP23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 OR4D1Q15615 310 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 CNPY1Q3B7I2 92 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 KANK2Q63ZY3 851 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 NCSTNQ92542 709 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 LPGAT1Q92604 370 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 EXT2Q93063 718 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 MYEOVQ96EZ4 313 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 ATOH8Q96SQ7 321 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 TCF12Q99081 682 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 TRIM4Q9C037 500 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 CCSER2Q9H7U1 834 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 AKTIPQ9H8T0 292 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 PLK2Q9NYY3 685 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 HSPA8P11142 646 aaKnown RBP23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 TSPAN8P19075 237 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 GNA12Q03113 381 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 PTPRCAPQ14761 206 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 IL23RQ5VWK5 629 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 ABI1Q8IZP0 508 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 AHI1Q8N157 1196 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 KIAA1191Q96A73 305 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 GPR62Q9BZJ7 368 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 DERL2Q9GZP9 239 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 ELAC1Q9H777 363 aaKnown RBP23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 MID1IP1Q9NPA3 183 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 DNAJC15Q9Y5T4 150 aa23.05■■□□□ 1.28
RABGGTA-202ENST00000399409 TCRBV3S1A0A5B6 114 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 H7C4K7 107 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 UBXN8O00124 270 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 KIF3CO14782 793 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 KERAO60938 352 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 VPS4BO75351 444 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 MTHFD2P13995 350 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 HOXD9P28356 352 aaPredicted RBP23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 ATP6V0D1P61421 351 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 PRMT9Q6P2P2 845 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 AFTPHQ6ULP2 937 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 STAG3L4Q8TBR4 150 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 ATP6V1E2Q96A05 226 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 PBXIP1Q96AQ6 731 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 C3orf30Q96M34 536 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 EFHD1Q9BUP0 239 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 NDUFAF1Q9Y375 327 aa23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 ARIH1Q9Y4X5 557 aaPredicted RBP23.04■■□□□ 1.28
RABGGTA-202ENST00000399409 PRORSD1PA6NEY8 169 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 ACSL4O60488 711 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 HDCP19113 662 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 PSMA3P25788 255 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 CALRP27797 417 aaKnown RBP23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 SLC7A1P30825 629 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 ZNF140P52738 457 aaPredicted RBP23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 CDH13P55290 713 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 TWIST2Q8WVJ9 160 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 GLT1D1Q96MS3 346 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 PSKH2Q96QS6 385 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 PCDHAC1Q9H158 963 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 TAS2R13Q9NYV9 303 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 UBA2Q9UBT2 640 aaPredicted RBP23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 CASP8AP2Q9UKL3 1982 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 ATP6AP2A0A1C7CYW4 349 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms