RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ADGRE3Q9BY15 652 aa25.47■■□□□ 1.67
U2AF1-203ENST00000398137 GDF3Q9NR23 364 aa25.47■■□□□ 1.67
U2AF1-203ENST00000398137 CDC23Q9UJX2 597 aa25.47■■□□□ 1.67
U2AF1-203ENST00000398137 AAR2Q9Y312 384 aaKnown RBP25.47■■□□□ 1.67
U2AF1-203ENST00000398137 NPIPB15A6NHN6 443 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-203ENST00000398137 CHRNA4P43681 627 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 TNNT3P45378 269 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-203ENST00000398137 VPS41P49754 854 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 RALGDSQ12967 914 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 BNIP3Q12983 259 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 OLIG2Q13516 323 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 NEK5Q6P3R8 708 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 CCNI2Q6ZMN8 369 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-203ENST00000398137 HORMAD1Q86X24 394 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 KIF18AQ8NI77 898 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 CXorf40AQ8TE69 158 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 GRK7Q8WTQ7 553 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 SKA1Q96BD8 255 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 MCCC1Q96RQ3 725 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-203ENST00000398137 CAAP1Q9H8G2 361 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 ERVMER34-1Q9H9K5 563 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 RAB6BQ9NRW1 208 aa25.46■■□□□ 1.67
U2AF1-203ENST00000398137 A0A0J9YYE9 177 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 CAPN8A6NHC0 703 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 TNFSF14O43557 240 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 ECEL1O95672 775 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 TRBC1P01850 177 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 KRT14P02533 472 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 EPHA8P29322 1005 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-203ENST00000398137 VIPR1P32241 457 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 NUDT1P36639 197 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 FDFT1P37268 417 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 RXRGP48443 463 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 SPARCL1Q14515 664 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 TMEM52BQ4KMG9 183 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 TMEM259Q4ZIN3 620 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 SETMARQ53H47 684 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-203ENST00000398137 KIAA1161Q6NSJ0 714 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 IQCHQ86VS3 1027 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 MARCH9Q86YJ5 346 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 KLHDC8BQ8IXV7 354 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 NDUFAF2Q8N183 169 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 SLC25A41Q8N5S1 370 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 SCRN2Q96FV2 425 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 APOL2Q9BQE5 337 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 ETNK1Q9HBU6 452 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 FZD3Q9NPG1 666 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 PPIL1Q9Y3C6 166 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 TRPM6Q9BX84 2022 aa25.45■■□□□ 1.66
U2AF1-203ENST00000398137 A0A0U1RQS6 177 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 LOC285095A0A1B0GVY8 99 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 GOLGA6CA6NDK9 693 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 GOLGA6BA6NDN3 693 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 TMEM8BA6NDV4 472 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 IGLON5A6NGN9 336 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 GOLGA8CPA6NN73 597 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 PRAMEF26H0Y7S4 382 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 CCDC188H7C350 402 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 MMP20O60882 483 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 GAS8O95995 478 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 AGTP01019 485 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 GOLGA6DP0CG33 693 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 CYP2A6P11509 494 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-203ENST00000398137 NFKBIAP25963 317 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 HNF1BP35680 557 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 RPS21P63220 83 aaKnown RBP25.44■■□□□ 1.66
U2AF1-203ENST00000398137 C2orf54Q08AI8 447 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 FGL2Q14314 439 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 SIRPB2Q5JXA9 342 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 TSPAN33Q86UF1 283 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 PDCD7Q8N8D1 485 aaKnown RBP25.44■■□□□ 1.66
U2AF1-203ENST00000398137 MYOCQ99972 504 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 GOLGA6AQ9NYA3 693 aa25.44■■□□□ 1.66
U2AF1-203ENST00000398137 ANKRD66B4E2M5 251 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 TAF4O00268 1085 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 SLC31A1O15431 190 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 USP12O75317 370 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 PIRTP0C851 137 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 LHCGRP22888 699 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 ADRA1AP35348 466 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 LIG3P49916 1009 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 CKAP4Q07065 602 aaKnown RBP25.43■■□□□ 1.66
U2AF1-203ENST00000398137 SLC1A5Q15758 541 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 CNGA3Q16281 694 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 KCTD11Q693B1 232 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 CCDC70Q6NSX1 233 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 TMPRSS7Q7RTY8 843 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 SPATA4Q8NEY3 305 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 ZCCHC14Q8WYQ9 949 aaKnown RBP25.43■■□□□ 1.66
U2AF1-203ENST00000398137 TBL1YQ9BQ87 522 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 LRRC40Q9H9A6 602 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 PCYOX1Q9UHG3 505 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 COQ6Q9Y2Z9 468 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 NEU2Q9Y3R4 380 aa25.43■■□□□ 1.66
U2AF1-203ENST00000398137 E7EVH7 732 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 HEXIM1O94992 359 aaKnown RBP25.42■■□□□ 1.66
U2AF1-203ENST00000398137 AP2A1O95782 977 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 EPOP01588 193 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 ELFN1P0C7U0 828 aa25.42■■□□□ 1.66
U2AF1-203ENST00000398137 C6P13671 934 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms