RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PCSK7Q16549 785 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 EOGTQ5NDL2 527 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 CERCAMQ5T4B2 595 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 DENND5AQ6IQ26 1287 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 KYAT3Q6YP21 454 aaKnown RBP14.94□□□□□ -0.02
CAPN3-207ENST00000397200 TRIM42Q8IWZ5 723 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 STK40Q8N2I9 435 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 DNAAF3Q8N9W5 541 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 IPMKQ8NFU5 416 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 TADA1Q96BN2 335 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 RBBP8Q99708 897 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 FSD1LQ9BXM9 530 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 CPEB1Q9BZB8 566 aaKnown RBP14.94□□□□□ -0.02
CAPN3-207ENST00000397200 OSBPL6Q9BZF3 934 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 MFSD1Q9H3U5 465 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 MRM3Q9HC36 420 aaKnown RBP14.94□□□□□ -0.02
CAPN3-207ENST00000397200 PRSS16Q9NQE7 514 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 PCMTD2Q9NV79 361 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 ADAM23O75077 832 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 GLRA3O75311 464 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 PIGNO95427 931 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 ERVK-10P10266 1014 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 CSE1LP55060 971 aaKnown RBP14.93□□□□□ -0.02
CAPN3-207ENST00000397200 WNT3AP56704 352 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 IHHQ14623 411 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 KDELC1Q6UW63 502 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 Q6ZS52 159 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 DSG4Q86SJ6 1040 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 NDUFAF2Q8N183 169 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 PAF1Q8N7H5 531 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 PJA1Q8NG27 643 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 GRIN3AQ8TCU5 1115 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 PTCD2Q8WV60 388 aaKnown RBP14.93□□□□□ -0.02
CAPN3-207ENST00000397200 ERLEC1Q96DZ1 483 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 IFT43Q96FT9 208 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 LRIG1Q96JA1 1093 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 NSMCE3Q96MG7 304 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 TBL1YQ9BQ87 522 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 TSSK1BQ9BXA7 367 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 MMP17Q9ULZ9 603 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 PCDHGC4Q9Y5F7 938 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 RAI2Q9Y5P3 530 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 WASF2Q9Y6W5 498 aa14.93□□□□□ -0.02
CAPN3-207ENST00000397200 WDR91A4D1P6 747 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TPP1O14773 563 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 SOCS5O75159 536 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 LEFTY1O75610 366 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 RASSF9O75901 435 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 DCTN3O75935 186 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 PRNPP04156 253 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TROVE2P10155 538 aaKnown RBP eCLIP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 BGNP21810 368 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CSRP3P50461 194 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 LIMK2P53671 638 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 NCALDP61601 193 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CDK18Q07002 472 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TRAF2Q12933 501 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 FZD5Q13467 585 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CAMK2GQ13555 558 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 INSCQ1MX18 579 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 ARSIQ5FYB1 569 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TEDDM1Q5T9Z0 273 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CES3Q6UWW8 571 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 KDELC2Q7Z4H8 507 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CAMK1DQ8IU85 385 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 FLCNQ8NFG4 579 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 PDCD6IPQ8WUM4 868 aaKnown RBP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 MRGPRX2Q96LB1 330 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 C7orf26Q96N11 449 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 FICDQ9BVA6 458 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TDRD1Q9BXT4 1180 aaKnown RBP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 OSBPL1AQ9BXW6 950 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 EMCNQ9ULC0 261 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CHKBQ9Y259 395 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TRIOO75962 3097 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CHURC1-FNTBB4DL54 471 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 RNASEH1O60930 286 aaKnown RBP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 ATG13O75143 517 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 UGT2B4P06133 528 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CTSLP07711 333 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 BPGMP07738 259 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 PDE1CQ14123 709 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 ARMC12Q5T9G4 340 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 PKN3Q6P5Z2 889 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 GDPD4Q6W3E5 623 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TRIM67Q6ZTA4 783 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 CNTN4Q8IWV2 1026 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 ARMC2Q8NEN0 867 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 TMIEQ8NEW7 156 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 MFSD3Q96ES6 412 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 FEM1CQ96JP0 617 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 ZNF641Q96N77 438 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 FAM129BQ96TA1 746 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 SUV39H2Q9H5I1 410 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 FBRSQ9HAH7 460 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 ARNT2Q9HBZ2 717 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 NSMCE4AQ9NXX6 385 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 SIT1Q9Y3P8 196 aa14.92□□□□□ -0.02
CAPN3-207ENST00000397200 ARIH1Q9Y4X5 557 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-207ENST00000397200 A0A1W2PQF6 199 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms