RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 KIFC1Q9BW19 673 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 WDR6Q9NNW5 1121 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 RBM22Q9NW64 420 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■■■□□ 17.9
CLIP2-203ENST00000395060 SMPD3Q9NY59 655 aaPredicted RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 VPS51Q9UID3 782 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PPP2R3BQ9Y5P8 575 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 TSPAN3O60637 253 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 SHMT2P34897 504 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 CYBRD1Q53TN4 286 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 AGAP9Q5VTM2 703 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 TMEM207Q6UWW9 146 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 IGFN1Q86VF2 1251 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 ADGRG5Q8IZF4 528 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 ATPAF2Q8N5M1 289 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 SNX19Q92543 992 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 SEPT8Q92599 483 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 TAMM41Q96BW9 452 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 CENPNQ96H22 339 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 KCTD14Q9BQ13 255 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 C9orf16Q9BUW7 83 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 COLEC11Q9BWP8 271 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 LHPPQ9H008 270 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 GSTO2Q9H4Y5 243 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 A0A0G2JLL6 359 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 MSI1O43347 362 aaKnown RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 ALBP02768 609 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 PRSS56P0CW18 603 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 MAGP20916 626 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 GPX3P22352 226 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 SLC6A2P23975 617 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 HOXA11P31270 313 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 ARCN1P48444 511 aaKnown RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 PRKAA2P54646 552 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 OXCT1P55809 520 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 IL1RL1Q01638 556 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 AAK1Q2M2I8 961 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 KIAA0319Q5VV43 1072 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 PAQR9Q6ZVX9 377 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 PRRT2Q7Z6L0 340 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 SAPCD2Q86UD0 394 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 OR10Q1Q8NGQ4 319 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 DQX1Q8TE96 717 aaKnown RBP14.31□□□□□ -0.12
CLIP2-203ENST00000395060 HSFY1Q96LI6 401 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 KLHL5Q96PQ7 755 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 DUSP16Q9BY84 665 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 TBCCD1Q9NVR7 557 aa14.31□□□□□ -0.12
CLIP2-203ENST00000395060 SMIM28A0A1B0GU29 152 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 AXIN1O15169 862 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ACOX3O15254 700 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 LTA4HP09960 611 aaKnown RBP14.3□□□□□ -0.12
CLIP2-203ENST00000395060 GFAPP14136 432 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 CAPGP40121 348 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 OPRL1P41146 370 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ADCYAP1R1P41586 468 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 GSK3BP49841 420 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 CCT8P50990 548 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 PAGE3Q5JUK9 113 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 TMEM53Q6P2H8 277 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 DHRS4L2Q6PKH6 230 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 LARP4Q71RC2 724 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ANKRD13AQ8IZ07 590 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 HPS1Q92902 700 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 CSF3RQ99062 836 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ACOX2Q99424 681 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 INTS7Q9NVH2 962 aaKnown RBP14.3□□□□□ -0.12
CLIP2-203ENST00000395060 GID8Q9NWU2 228 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 RCOR3Q9P2K3 495 aaPredicted RBP14.3□□□□□ -0.12
CLIP2-203ENST00000395060 RAD54BQ9Y620 910 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 PARP14Q460N5 1801 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ZFC3H1O60293 1989 aaKnown RBP14.3□□□□□ -0.12
CLIP2-203ENST00000395060 GJB3O75712 270 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 LIPEQ05469 1076 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 C6orf183Q5T699 404 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 TFAP2DQ7Z6R9 452 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ABI1Q8IZP0 508 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 TWIST2Q8WVJ9 160 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 PTERQ96BW5 349 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 SDCCAG3Q96C92 435 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 LRRC58Q96CX6 371 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 CDCA5Q96FF9 252 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 SNX27Q96L92 541 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 MARCH4Q9P2E8 410 aaPredicted RBP14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ZNHIT2Q9UHR6 403 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 SIP14410 1827 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.3□□□□□ -0.12
CLIP2-203ENST00000395060 AGRPO00253 132 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 TCF3P15923 654 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 HOXD12P35452 270 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 IDUAP35475 653 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 HECTD2Q5U5R9 776 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 UNC93AQ86WB7 457 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ALDH16A1Q8IZ83 802 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 MIER2Q8N344 545 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 TTC39CQ8N584 583 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 ARL10Q8N8L6 244 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 CCDC138Q96M89 665 aa14.3□□□□□ -0.12
CLIP2-203ENST00000395060 PPM1MQ96MI6 270 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms