RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 HERC2P3Q9BVR0 1158 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 NACA2Q9H009 215 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 STK39Q9UEW8 545 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 DAPK2Q9UIK4 370 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 DSEQ9UL01 958 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 MYRFQ9Y2G1 1151 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 TCAF2A6NFQ2 919 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 PMPCBO75439 489 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 TIPRLO75663 272 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 CAPNS1P04632 268 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 PPARGP37231 505 aaPredicted RBP15.56■□□□□ 0.08
PTBP1-204ENST00000394601 CAP1Q01518 475 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 TRIM32Q13049 653 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 PLCL1Q15111 1095 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 ELMSAN1Q6PJG2 1045 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 TMEM207Q6UWW9 146 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 RTN4RL1Q86UN2 441 aaPredicted RBP15.56■□□□□ 0.08
PTBP1-204ENST00000394601 RP9Q8TA86 221 aaKnown RBP15.56■□□□□ 0.08
PTBP1-204ENST00000394601 UBXN10Q96LJ8 280 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 CATSPERBQ9H7T0 1116 aa15.56■□□□□ 0.08
PTBP1-204ENST00000394601 WARS2Q9UGM6 360 aaKnown RBP15.56■□□□□ 0.08
PTBP1-204ENST00000394601 NEMP2A6NFY4 417 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 TYMPP19971 482 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 GPR15P49685 360 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 BCAP31P51572 246 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 GEMP55040 296 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 NME5P56597 212 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 TIAL1Q01085 375 aaKnown RBP eCLIP15.55■□□□□ 0.083e-9■□□□□ 10.3
PTBP1-204ENST00000394601 ADGRE1Q14246 886 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 TECRLQ5HYJ1 363 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 OGFRL1Q5TC84 451 aaPredicted RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 CHSY3Q70JA7 882 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 SETD3Q86TU7 594 aaPredicted RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 HEATR4Q86WZ0 1026 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 IFNL1Q8IU54 200 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 UMODL1-AS1Q8N2C9 162 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 PSD4Q8NDX1 1056 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 PPHLN1Q8NEY8 458 aaKnown RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 RPL10LQ96L21 214 aaKnown RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 COPG1Q9Y678 874 aaKnown RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 MROH6A6NGR9 719 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 J3KR12 359 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 SDHDO14521 159 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 NPHS1O60500 1241 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 HAPLN1P10915 354 aaPredicted RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 STMN1P16949 149 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 THPOP40225 353 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 LEPRP48357 1165 aaKnown RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 CEACAM7Q14002 265 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 UGP2Q16851 508 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 BTBD8Q5XKL5 378 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 ZNF470Q6ECI4 717 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 GALNT18Q6P9A2 607 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 ZNF280BQ86YH2 543 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 KLHL32Q96NJ5 620 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 POLR1BQ9H9Y6 1135 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 POLE4Q9NR33 117 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 ARL1P40616 181 aaPredicted RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 WNT3AP56704 352 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 NUP107P57740 925 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 SPIDRQ14159 915 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 NANOGP8Q6NSW7 305 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 ZBTB49Q6ZSB9 765 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 KDELC2Q7Z4H8 507 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 METTL23Q86XA0 190 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 PGBD5Q8N414 524 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 ANKRD49Q8WVL7 239 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 SGF29Q96ES7 293 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 RANBP9Q96S59 729 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 SERPINI1Q99574 410 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 ADAM2Q99965 735 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 MRPL57Q9BQC6 102 aaKnown RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 TRIM62Q9BVG3 475 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 SLC25A51Q9H1U9 297 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 SIAEQ9HAT2 523 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 GMPR2Q9P2T1 348 aaKnown RBP15.55■□□□□ 0.08
PTBP1-204ENST00000394601 VTI1BQ9UEU0 232 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 MID2Q9UJV3 735 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 FBXO5Q9UKT4 447 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 RNF11Q9Y3C5 154 aa15.55■□□□□ 0.08
PTBP1-204ENST00000394601 IGLV3-10A0A075B6K4 115 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 CBFA2T3O75081 653 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 GMNNO75496 209 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 TCEA1P23193 301 aaKnown RBP15.54■□□□□ 0.08
PTBP1-204ENST00000394601 PFKPQ01813 784 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 DNASE1L3Q13609 305 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 HERC3Q15034 1050 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 ALFQ53S48 1182 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 MSANTD2Q6P1R3 559 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 Q6ZNX1 250 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 TEX26Q8N6G2 289 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 FAM110BQ8TC76 370 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 ISOC1Q96CN7 298 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 ARHGAP39Q9C0H5 1083 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 IL37Q9NZH6 218 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 IPO11Q9UI26 975 aaKnown RBP15.54■□□□□ 0.08
PTBP1-204ENST00000394601 MAN1A2O60476 641 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 NOL3O60936 208 aaKnown RBP15.54■□□□□ 0.08
PTBP1-204ENST00000394601 GJB3O75712 270 aa15.54■□□□□ 0.08
PTBP1-204ENST00000394601 CNTN5O94779 1100 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms