RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 FAM25GB3EWG6 89 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 H7C0C1 242 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 CSO75390 466 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 NOL4O94818 638 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 UBTFL6P0CB48 400 aaPredicted RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ARSAP15289 507 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 PSMA3P25788 255 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 NDST1P52848 882 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ERVPABLB-1P60509 514 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 FKBP3Q00688 224 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ECT2LQ008S8 904 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 KPNB1Q14974 876 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ACOX1Q15067 660 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 TXNDC11Q6PKC3 985 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 DENND6AQ8IWF6 608 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 FAM46DQ8NEK8 389 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ENKURQ8TC29 256 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ASB12Q8WXK4 309 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 UCN2Q96RP3 112 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 FZD4Q9ULV1 537 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 TCF20Q9UGU0 1960 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 H3BRJ5 948 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 USP12O75317 370 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ARHGEF15O94989 841 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 APOA1P02647 267 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 PTPN3P26045 913 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 SERPINB1P30740 379 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 PAFAH1B1P43034 410 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 CSNK1EP49674 416 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 STARP49675 285 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 PAK1Q13153 545 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 CNGA2Q16280 664 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 KNOP1Q1ED39 458 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 TTI2Q6NXR4 508 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 LRRC8BQ6P9F7 803 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 TMEM40Q8WWA1 233 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 AKAP1Q92667 903 aaKnown RBP eCLIP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 CCSER1Q9C0I3 900 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ZIM2Q9NZV7 527 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ANKRD6Q9Y2G4 727 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 RAB19A4D1S5 217 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 TLR4O00206 839 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ALOX15BO15296 676 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 HRO43593 1189 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 MYBL1P10243 752 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 FDPSP14324 419 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ETV1P50549 477 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 GRIK2Q13002 908 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 CYP2A13Q16696 494 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 RGS21Q2M5E4 152 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 HYIQ5T013 277 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 RAB12Q6IQ22 244 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 FAM20CQ8IXL6 584 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 THRSPQ92748 146 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 ZNF707Q96C28 371 aaPredicted RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 CCDC3Q9BQI4 270 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 BRINP2Q9C0B6 783 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 WDCPQ9H6R7 721 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 EXO5Q9H790 373 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 IFT22Q9H7X7 185 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 PNPLA8Q9NP80 782 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 PPANQ9NQ55 473 aaKnown RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 DDIT4Q9NX09 232 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 MARCH5Q9NX47 278 aa8.12□□□□□ -1.11
LIMS1-203ENST00000393310 SAE1Q9UBE0 346 aaPredicted RBP8.12□□□□□ -1.11
LIMS1-203ENST00000393310 A0A1B0GVM2 712 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 TCAF2A6NFQ2 919 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 AREL1O15033 823 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 CUL2Q13617 745 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 CST6Q15828 149 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 SSX2Q16385 188 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 CDCA2Q69YH5 1023 aaPredicted RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ATL1Q8WXF7 558 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 CGREF1Q99674 301 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 OSGEPL1Q9H4B0 414 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PRDM8Q9NQV8 689 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 UCKL1Q9NWZ5 548 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 RUVBL1Q9Y265 456 aaKnown RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 AP3M1Q9Y2T2 418 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 OAS3Q9Y6K5 1087 aaKnown RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 M0QZQ0 153 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 GMFGO60234 142 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 POP4O95707 220 aaKnown RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 LTFP02788 710 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 CYP11A1P05108 521 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 GOT1P17174 413 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 P2RY2P41231 377 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 DPYSQ14117 519 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ECM1Q16610 540 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 FAM76BQ5HYJ3 339 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 USP45Q70EL2 814 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 SLC9B2Q86UD5 537 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ZDHHC17Q8IUH5 632 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PLXDC1Q8IUK5 500 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 BBS7Q8IWZ6 715 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 RAVER1Q8IY67 606 aaKnown RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ZADH2Q8N4Q0 377 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 OR52K2Q8NGK3 314 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms