RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PQLC1Q8N2U9 271 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 DBF4BQ8NFT6 615 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 HBEGFQ99075 208 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SLC25A23Q9BV35 468 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 TMEM30AQ9NV96 361 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 EGFL7Q9UHF1 273 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 KIF13BQ9NQT8 1826 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 AURKAO14965 403 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SIX3O95343 332 aaPredicted RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 COL6A2P12110 1019 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 HGFP14210 728 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 GRIA3P42263 894 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 AQP4P55087 323 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 RPS24P62847 133 aaKnown RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 SP3Q02447 781 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 PERM1Q5SV97 790 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 FAM45BPQ6NSW5 357 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 FAM45AQ8TCE6 357 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SEPHS2Q99611 448 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 ADGRE3Q9BY15 652 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 CCSER2Q9H7U1 834 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 INPP4BO15327 924 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 ZBTB14O43829 449 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 CTPS1P17812 591 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 KCNQ1P51787 676 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 NEK2P51955 445 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SLC7A2P52569 658 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 THOP1P52888 689 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 MSLNQ13421 630 aaPredicted RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 MAPK11Q15759 364 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 CTC1Q2NKJ3 1217 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 MORN1Q5T089 497 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 KIAA0930Q6ICG6 404 aaPredicted RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 AAGABQ6PD74 315 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SERINC5Q86VE9 423 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 FNDC5Q8NAU1 212 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 DNAJB14Q8TBM8 379 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 COQ7Q99807 217 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 C1orf50Q9BV19 199 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 KIFC1Q9BW19 673 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 MKS1Q9NXB0 559 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 PLK2Q9NYY3 685 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 ZMYM5Q9UJ78 669 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 DNMT3LQ9UJW3 386 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 BAG5Q9UL15 447 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 NDUFAF1Q9Y375 327 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 ATAD5Q96QE3 1844 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 UBXN8O00124 270 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 MGEA5O60502 916 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 GOT2P00505 430 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 XRCC1P18887 633 aaPredicted RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 RECQLP46063 649 aaPredicted RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 TRPC1P48995 793 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 SCAPQ12770 1279 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 FRG1Q14331 258 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 NR6A1Q15406 480 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TBCELQ5QJ74 424 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 EPGNQ6UW88 154 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 DNAJC14Q6Y2X3 702 aaPredicted RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 SAPCD2Q86UD0 394 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 DHFR2Q86XF0 187 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 CROCCP3Q8IVE0 287 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 ENDOVQ8N8Q3 282 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 ACOX2Q99424 681 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 HGH1Q9BTY7 390 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 CLPBQ9H078 707 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 ING2Q9H160 280 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 PRELID1Q9Y255 219 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 PCDHB9Q9Y5E1 797 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 SLC35E2BP0CK96 405 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 AKT1P31749 480 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 RAP1GDS1P52306 607 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 ELAVL2Q12926 359 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 BFSP2Q13515 415 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 STXBP5Q5T5C0 1151 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 STAG3L4Q8TBR4 150 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 ARMC7Q9H6L4 198 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 NOL6Q9H6R4 1146 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 WWOXQ9NZC7 414 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 DKK3Q9UBP4 350 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 GMEB1Q9Y692 573 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 NUMBLQ9Y6R0 609 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 SYCE1LA8MT33 242 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 MAFKO60675 156 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TACR2P21452 398 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 MAGEA3P43357 314 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 RGS4P49798 205 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 GATMP50440 423 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 HECTD3Q5T447 861 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 RNF219Q5W0B1 726 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms