RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 CDCP1Q9H5V8 836 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 CNOT10Q9H9A5 744 aaKnown RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 IL23AQ9NPF7 189 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 DDX4Q9NQI0 724 aaKnown RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PRMT8Q9NR22 394 aaPredicted RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ARL8BQ9NVJ2 186 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 SOHLH2Q9NX45 425 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 FBXW11Q9UKB1 542 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ITGA11Q9UKX5 1188 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 WBP11Q9Y2W2 641 aaKnown RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PRDM15P57071 1507 aaPredicted RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 FGD6Q6ZV73 1430 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 KIAA1107Q9UPP5 1409 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 SPATA31A6Q5VVP1 1343 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ERVK-7P63135 1459 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 CCDC18Q5T9S5 1454 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 FAM237AA0A1B0GTK4 181 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 DRGXA6NNA5 263 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 BIN1O00499 593 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 STC2O76061 302 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 KIAA0754O94854 1291 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 SUN1O94901 812 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 AKR7A3O95154 331 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 VNN1O95497 513 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 PDGFBP01127 241 aaPredicted RBP6.49□□□□□ -1.37
TRAV35-201ENST00000390462 TGFAP01135 160 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 ITGB2P05107 769 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 VIMP08670 466 aaKnown RBP6.49□□□□□ -1.37
TRAV35-201ENST00000390462 OR52Z1P0C646 297 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 IL7RP16871 459 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 TACR2P21452 398 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 FBLN1P23142 703 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 GCSHP23434 173 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 CD27P26842 260 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 ANP32AP39687 249 aaKnown RBP6.49□□□□□ -1.37
TRAV35-201ENST00000390462 MDH1P40925 334 aaKnown RBP6.49□□□□□ -1.37
TRAV35-201ENST00000390462 MC3RP41968 323 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 PTPN9P43378 593 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 ASMTP46597 345 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 BLKP51451 505 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 IRAK1P51617 712 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 CLCN3P51790 818 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 TFAP4Q01664 338 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 RBPJQ06330 500 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 DPYSQ14117 519 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 COL28A1Q2UY09 1125 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 EDRF1Q3B7T1 1238 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 HSP90AB3PQ58FF7 597 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 KCNT1Q5JUK3 1230 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 SHEQ5VZ18 495 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 PLA2G4FQ68DD2 849 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 CENPPQ6IPU0 288 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 NEK5Q6P3R8 708 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 ARHGAP11AQ6P4F7 1023 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 GLB1LQ6UWU2 654 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 IL20RBQ6UXL0 311 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 NHLRC1Q6VVB1 395 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 USP30Q70CQ3 517 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 PRSS45Q7RTY3 260 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 TMPRSS9Q7Z410 1059 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 HAUS6Q7Z4H7 955 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 DNAAF1Q8NEP3 725 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 NUDT10Q8NFP7 164 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 OR14K1Q8NGZ2 314 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 MYLIPQ8WY64 445 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 MIB2Q96AX9 1013 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 NUDT11Q96G61 164 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 BORCS6Q96GS4 357 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 AJUBAQ96IF1 538 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 RMDN2Q96LZ7 410 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 ZPBPQ9BS86 351 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 INPP5KQ9BT40 448 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 C11orf84Q9BUA3 381 aaPredicted RBP6.49□□□□□ -1.37
TRAV35-201ENST00000390462 CARD11Q9BXL7 1154 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 COQ10BQ9H8M1 238 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 ANKZF1Q9H8Y5 726 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 DNAJC11Q9NVH1 559 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 PAG1Q9NWQ8 432 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 NMRK1Q9NWW6 199 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRAV35-201ENST00000390462 IL17BQ9UHF5 180 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 CCPG1Q9ULG6 757 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 ZNF148Q9UQR1 794 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 PIK3C2BO00750 1634 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 SPATA31A3Q5VYP0 1347 aa6.49□□□□□ -1.37
TRAV35-201ENST00000390462 CHD2O14647 1828 aaKnown RBP6.48□□□□□ -1.37
TRAV35-201ENST00000390462 NSD2O96028 1365 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 A0A0G2JPF8 293 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 WIPF3A6NGB9 483 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 HNRNPCL3B7ZW38 293 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 ERN1O75460 977 aaKnown RBP6.48□□□□□ -1.37
TRAV35-201ENST00000390462 MT-ATP6P00846 226 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 ABHD2P08910 425 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 HOXB5P09067 269 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 HNRNPCL4P0DMR1 293 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 ACTN1P12814 892 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 TNFRSF1AP19438 455 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 GLDCP23378 1020 aa6.48□□□□□ -1.37
TRAV35-201ENST00000390462 GSTM2P28161 218 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms