RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SYN1P17600 705 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 NR4A1P22736 598 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 GABRB3P28472 473 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 RGRP47804 291 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 GALNT2Q10471 571 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 GTF2H3Q13889 308 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 TSTD2Q5T7W7 516 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 UTS2BQ765I0 119 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 PIWIL4Q7Z3Z4 852 aaKnown RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 RTN4RL1Q86UN2 441 aaPredicted RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 SH3RF2Q8TEC5 729 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 NRG4Q8WWG1 115 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 TRIM62Q9BVG3 475 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 TMEM165Q9HC07 324 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 TAS2R13Q9NYV9 303 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 CFAP97Q9P2B7 532 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 ZNF180Q9UJW8 692 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 A0A1W2PQ45 241 aaPredicted RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 A0A1W2PQY0 241 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 CASQ2O14958 399 aaPredicted RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 SLC35E2BP0CK96 405 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 HSPA7P48741 367 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 STK19P49842 368 aaPredicted RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 CDKN2DP55273 166 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 BFSP2Q13515 415 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 C16orf89Q6UX73 402 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 SPPL2CQ8IUH8 684 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 FBXO30Q8TB52 745 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 MRPS31Q92665 395 aaKnown RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 SKA1Q96BD8 255 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 BTN2A3PQ96KV6 586 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 SUSD3Q96L08 255 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 VAT1Q99536 393 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 BBS2Q9BXC9 721 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 KLHL4Q9C0H6 718 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 IGFLR1Q9H665 355 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 ARMC7Q9H6L4 198 aa11.67□□□□□ -0.54
DDR1-227ENST00000376570 NOL11Q9H8H0 719 aaKnown RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 WARS2Q9UGM6 360 aaKnown RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 RP1L1Q8IWN7 2480 aaPredicted RBP11.67□□□□□ -0.54
DDR1-227ENST00000376570 MTMR11A4FU01 709 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 OR2AG2A6NM03 316 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 PDLIM1O00151 329 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 KPNA3O00505 521 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 PIP5K1BO14986 540 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 TM7SF2O76062 418 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ITPKAP23677 461 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 FKBP1BP68106 108 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ZNF648Q5T619 568 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 RSPO2Q6UXX9 243 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 MBOAT1Q6ZNC8 495 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 PBXIP1Q96AQ6 731 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ALG2Q9H553 416 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 SOX17Q9H6I2 414 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 PLAC1Q9HBJ0 212 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 SIRPGQ9P1W8 387 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 SEPT3Q9UH03 358 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 FGF10O15520 208 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 PSMD3O43242 534 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 HNRNPCL1O60812 293 aaKnown RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 OR4F21O95013 312 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ITGAXP20702 1163 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ME2P23368 584 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 CCNCP24863 283 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 KCNK10P57789 538 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ARCQ7LC44 396 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ADCK2Q7Z695 626 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 CLEC4FQ8N1N0 589 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 SLC22A17Q8WUG5 538 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 RNF145Q96MT1 663 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 OLFM3Q96PB7 478 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 SLC2A13Q96QE2 648 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 ACTR8Q9H981 624 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 SLC38A8A6NNN8 435 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 NEDD8-MDP1E9PL57 170 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 KPNA6O60684 536 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 CPSF4O95639 269 aaKnown RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 STAU1O95793 577 aaKnown RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 RBP1P09455 135 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 MLNP12872 115 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 BMP1P13497 986 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 SELPP16109 830 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 RPL10P27635 214 aaKnown RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 HMGCS1Q01581 520 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 TNFAIP8L3Q5GJ75 292 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 GPSM1Q86YR5 675 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 LZTR1Q8N653 840 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 MZB1Q8WU39 189 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 EZH1Q92800 747 aaPredicted RBP11.66□□□□□ -0.54
DDR1-227ENST00000376570 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 EURLQ9NYK6 297 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 PRKAG2Q9UGJ0 569 aa11.66□□□□□ -0.54
DDR1-227ENST00000376570 A8MT66 165 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms