RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 BHLHE22Q8NFJ8 381 aaPredicted RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 CEP70Q8NHQ1 597 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 RNF139Q8WU17 664 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 GAB3Q8WWW8 586 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 HDAC11Q96DB2 347 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 CCDC126Q96EE4 140 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 FCRL3Q96P31 734 aaPredicted RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 AGAP3Q96P47 875 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 NPY6RQ99463 290 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 PKP2Q99959 881 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 GBA3Q9H227 469 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 SNX25Q9H3E2 840 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 IRAK4Q9NWZ3 460 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 MTF2Q9Y483 593 aaPredicted RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 TCRBV3S1A0A5B6 114 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 TCAF2A6NFQ2 919 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 TRIM64A6NGJ6 449 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 SHISA7A6NL88 538 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 H3BNH8 94 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 XPO1O14980 1071 aaKnown RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 TRIM24O15164 1050 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 ECI2O75521 394 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 VAPBO95292 243 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 RHOP08100 348 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 KCNE1P15382 129 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 GOT1P17174 413 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 MPSTP25325 297 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 TKTL1P51854 596 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 EMP3P54852 163 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 INHBCP55103 352 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 NUP107P57740 925 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 PFKPQ01813 784 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 MRPL58Q14197 206 aaKnown RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 ZBTB6Q15916 424 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 ZNF528Q3MIS6 628 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 FAM45BPQ6NSW5 357 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 RWDD4Q6NW29 188 aaKnown RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 ZC3H14Q6PJT7 736 aaKnown RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 PIWIL4Q7Z3Z4 852 aaKnown RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 CMC1Q7Z7K0 106 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 KCNMB4Q86W47 210 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 LILRA2Q8N149 483 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 PELI3Q8N2H9 469 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 TMEM151AQ8N4L1 468 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 ANKFN1Q8N957 763 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 MFSD2AQ8NA29 543 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 HIPK4Q8NE63 616 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 BEST2Q8NFU1 509 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 ZNF461Q8TAF7 563 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 FAM45AQ8TCE6 357 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 CLDN23Q96B33 292 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 RCN3Q96D15 328 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 RMDN1Q96DB5 314 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 CNBD2Q96M20 576 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 ZMAT2Q96NC0 199 aaKnown RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 PRPF18Q99633 342 aaKnown RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 KXD1Q9BQD3 176 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 KIFC1Q9BW19 673 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 ANKRD60Q9BZ19 345 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 PLA2G2FQ9BZM2 168 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 GRIP2Q9C0E4 1043 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 COPS7BQ9H9Q2 264 aaPredicted RBP11.55□□□□□ -0.56
USF1-201ENST00000368019 PREBQ9HCU5 417 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 LTB4R2Q9NPC1 389 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 GDE1Q9NZC3 331 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 SLC17A6Q9P2U8 582 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 TLK1Q9UKI8 766 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 SLC8A2Q9UPR5 921 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 DNAH14Q0VDD8 3507 aa11.55□□□□□ -0.56
USF1-201ENST00000368019 NCOR2Q9Y618 2525 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 A0A087X1B8 175 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 A0A0J9YVX5 310 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 FAM170BA6NMN3 283 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 CACNG3O60359 315 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 ZMPSTE24O75844 475 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 MAP3K6O95382 1288 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 PTPN3P26045 913 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 PNPLA4P41247 253 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 GRIA4P48058 902 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 SULT1E1P49888 294 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 ERFP50548 548 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 MS4A2Q01362 244 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 SFSWAPQ12872 951 aaKnown RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 SEMA3BQ13214 749 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 FZD5Q13467 585 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 PTK2BQ14289 1009 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 PPP2R5DQ14738 602 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 SOWAHAQ2M3V2 549 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 MGAT5BQ3V5L5 792 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 ARL13AQ5H913 290 aaPredicted RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 PRSS36Q5K4E3 855 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
USF1-201ENST00000368019 NAPEPLDQ6IQ20 393 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 PID1Q7Z2X4 250 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 LIMS2Q7Z4I7 341 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 ACOT1Q86TX2 421 aa11.54□□□□□ -0.56
USF1-201ENST00000368019 ZC3HC1Q86WB0 502 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms