RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TGFB3P10600 412 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 ERCC2P18074 760 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 SLC1A2P43004 574 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 MRPL19P49406 292 aaKnown RBP12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 BFSP2Q13515 415 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 CYP51A1Q16850 503 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 FAM219BQ5XKK7 198 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 NAPEPLDQ6IQ20 393 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 CYP2U1Q7Z449 544 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 GPR20Q99678 358 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 FUNDC2Q9BWH2 189 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 AKTIPQ9H8T0 292 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 FBXO8Q9NRD0 319 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 ERVK-11Q9UQG0 969 aa12.12□□□□□ -0.47
SMARCAL1-201ENST00000357276 I6L893 689 aaPredicted RBP12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 IMPDH1P20839 514 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 GABARAPL2P60520 117 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 SCAPQ12770 1279 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 SELENBP1Q13228 472 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 DPY19L1Q2PZI1 675 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 THOC7Q6I9Y2 204 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 CRYBG2Q8N1P7 616 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 PIK3C3Q8NEB9 887 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 HDAC2Q92769 488 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 TPK1Q9H3S4 243 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 ATP13A3Q9H7F0 1226 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 SDR39U1Q9NRG7 319 aaPredicted RBP12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 SACM1LQ9NTJ5 587 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 KLHL3Q9UH77 587 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 ST14Q9Y5Y6 855 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 OAS3Q9Y6K5 1087 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 PDCD11Q14690 1871 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 MSI1O43347 362 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 HTR1BP28222 390 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 TRIM32Q13049 653 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 INAVAQ3KP66 663 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 VPS26BQ4G0F5 336 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 CLEC6AQ6EIG7 209 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 DENND5AQ6IQ26 1287 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 ITIH5Q86UX2 942 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 SLC22A9Q8IVM8 553 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 TSPEARQ8WU66 669 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 S100ZQ8WXG8 99 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 BCL7BQ9BQE9 202 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 TREX1Q9NSU2 369 aa12.11□□□□□ -0.47
SMARCAL1-201ENST00000357276 NR5A2O00482 541 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 LDLRP01130 860 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ALPLP05186 524 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 GSK3BP49841 420 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ALDH3A2P51648 485 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 AIF1P55008 147 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 STX1BP61266 288 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 FAM83EQ2M2I3 478 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 TRAPPC12Q8WVT3 735 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 NTAN1Q96AB6 310 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 SLC2A13Q96QE2 648 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 CDHR5Q9HBB8 845 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 CYP4F12Q9HCS2 524 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PIGVQ9NUD9 493 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 THG1LQ9NWX6 298 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ANAPC2Q9UJX6 822 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 GJA3Q9Y6H8 435 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 UNCXA6NJT0 531 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 FAM47E-STBD1D6RA91 191 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PPEF2O14830 753 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 KDM1AO60341 852 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 FGF4P08620 206 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PTPRAP18433 802 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PCMT1P22061 227 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ACVR2AP27037 513 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZFP36L2P47974 494 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 NFKB2Q00653 900 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 CAPRIN1Q14444 709 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZNF280DQ6N043 979 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 R3HCC1LQ7Z5L2 792 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 DCP1BQ8IZD4 617 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 OSCP1Q8WVF1 389 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 SGCDQ92629 289 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 SYT17Q9BSW7 474 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 RMND5AQ9H871 391 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ATP6AP2A0A1C7CYW4 349 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 INPP4BO15327 924 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PSMD3O43242 534 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 HCRTO43612 131 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ATP6AP2O75787 350 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 EGFRP00533 1210 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ARF4P18085 180 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 NFKBIAP25963 317 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 CLCN3P51790 818 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ARSFP54793 590 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ACAP2Q15057 778 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms