RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 HLA-DQB2P05538 268 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 SFTPCP11686 197 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 FDFT1P37268 417 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 CSNK1DP48730 415 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 GEMIN4P57678 1058 aaKnown RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 NFKB2Q00653 900 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 GUCY2DQ02846 1103 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 KCNJ11Q14654 390 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 PPP1R7Q15435 360 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 RNASEH2BQ5TBB1 312 aaKnown RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 MARC1Q5VT66 337 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 MBLAC2Q68D91 279 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 RETSATQ6NUM9 610 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 HIBCHQ6NVY1 386 aaPredicted RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 AHI1Q8N157 1196 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 NAT8LQ8N9F0 302 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 CPT1BQ92523 772 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 ART4Q93070 314 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 IMP4Q96G21 291 aaKnown RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 SPON2Q9BUD6 331 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 PARD6BQ9BYG5 372 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 SLC25A51Q9H1U9 297 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 GBA3Q9H227 469 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 GLOD4Q9HC38 313 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 FAM114A2Q9NRY5 505 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 RBM22Q9NW64 420 aaKnown RBP eCLIP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 UBA2Q9UBT2 640 aaPredicted RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 VPS28Q9UK41 221 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 HPCAL4Q9UM19 191 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 MAN2B2Q9Y2E5 1009 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 SNX24Q9Y343 169 aa12.11□□□□□ -0.47
LCE4A-201ENST00000335535 UTP11Q9Y3A2 253 aaKnown RBP12.11□□□□□ -0.47
LCE4A-201ENST00000335535 USP12O75317 370 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 STK10O94804 968 aaKnown RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 SUN1O94901 812 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 ASLP04424 464 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 MMP2P08253 660 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 MYF5P13349 255 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 TPSB2P20231 275 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 CES1P23141 567 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 CD38P28907 300 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 MMP13P45452 471 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 SERPINH1P50454 418 aaKnown RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 NXPH1P58417 271 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 CDK16Q00536 496 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 TLE1Q04724 770 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 NIPAL4Q0D2K0 466 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 BNIP3Q12983 259 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 GPS1Q13098 491 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 CUL1Q13616 776 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 TPSAB1Q15661 275 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 KCTD19Q17RG1 926 aaPredicted RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 FAM182AQ5T1J6 154 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 CCDC70Q6NSX1 233 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 SERPINA13PQ6UXR4 307 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 PID1Q7Z2X4 250 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 PRPF39Q86UA1 669 aaKnown RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 HOOK3Q86VS8 718 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 IFT20Q8IY31 132 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 MCUQ8NE86 351 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 LRRC45Q96CN5 670 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 SNF8Q96H20 258 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 NSMCE3Q96MG7 304 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 CEP44Q9C0F1 390 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 TMEM245Q9H330 911 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 SP110Q9HB58 689 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 ETNK1Q9HBU6 452 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 EPB41L5Q9HCM4 733 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 EIF2B3Q9NR50 452 aaKnown RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 LHX3Q9UBR4 397 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 ACTL7AQ9Y615 435 aa12.1□□□□□ -0.47
LCE4A-201ENST00000335535 V9GYY5 206 aaPredicted RBP12.1□□□□□ -0.47
LCE4A-201ENST00000335535 LRBAP50851 2863 aa12.09□□□□□ -0.47
LCE4A-201ENST00000335535 ERI2A8K979 691 aaKnown RBP12.09□□□□□ -0.47
LCE4A-201ENST00000335535 SMAD6O43541 496 aaKnown RBP12.09□□□□□ -0.47
LCE4A-201ENST00000335535 OPA1O60313 960 aa12.09□□□□□ -0.47
LCE4A-201ENST00000335535 TMCC1O94876 653 aa12.09□□□□□ -0.47
LCE4A-201ENST00000335535 SRPRAP08240 638 aaKnown RBP12.09□□□□□ -0.47
LCE4A-201ENST00000335535 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
LCE4A-201ENST00000335535 SRCP12931 536 aa12.09□□□□□ -0.47
LCE4A-201ENST00000335535 ADRA1AP35348 466 aa12.09□□□□□ -0.47
LCE4A-201ENST00000335535 ADCY8P40145 1251 aa12.09□□□□□ -0.47
LCE4A-201ENST00000335535 CTSOP43234 321 aaPredicted RBP12.09□□□□□ -0.47
LCE4A-201ENST00000335535 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
LCE4A-201ENST00000335535 INHBCP55103 352 aa12.09□□□□□ -0.47
LCE4A-201ENST00000335535 RPS14P62263 151 aaKnown RBP12.09□□□□□ -0.47
LCE4A-201ENST00000335535 VSNL1P62760 191 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms