RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RHOAP61586 193 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TRAF2Q12933 501 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 PDAP1Q13442 181 aaKnown RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 ATXN7L2Q5T6C5 722 aaPredicted RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 ACAD11Q709F0 780 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 MFN1Q8IWA4 741 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 OR6K2Q8NGY2 324 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 DTX3LQ8TDB6 740 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 DDI1Q8WTU0 396 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 STMN2Q93045 179 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 PTERQ96BW5 349 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TM6SF2Q9BZW4 377 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 CDYLQ9Y232 598 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 PDE4DIPQ5VU43 2346 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 MYLKQ15746 1914 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 ABCB7O75027 752 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 NDUFS3O75489 264 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 SKAP2O75563 359 aaPredicted RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 KRT36O76013 467 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 SUPT7LO94864 414 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 LUC7L3O95232 432 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 TIMP1P01033 207 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 COX4I1P13073 169 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 ZNF37AP17032 561 aaPredicted RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 OGNP20774 298 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 LPOP22079 712 aaPredicted RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 CES1P23141 567 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 SLC26A3P40879 764 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 EPHB1P54762 984 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 TIAL1Q01085 375 aaKnown RBP eCLIP7.56□□□□□ -1.2
IFT88-201ENST00000319980 NSUN2Q08J23 767 aaKnown RBP eCLIP7.56□□□□□ -1.2
IFT88-201ENST00000319980 CUL3Q13618 768 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 RCN1Q15293 331 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 CCDC6Q16204 474 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 TPGS1Q6ZTW0 290 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 ENDOVQ8N8Q3 282 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 HJURPQ8NCD3 748 aaPredicted RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 MRPS31Q92665 395 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 CCDC68Q9H2F9 335 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 VPS51Q9UID3 782 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 RIMKLBQ9ULI2 386 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 C15orf41Q9Y2V0 281 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 KIAA0100Q14667 2235 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 A0A088AWK7 358 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 A0A1W2PRU2 124 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 ZBBXA8MT70 800 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 STX7O15400 261 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 SRP72O76094 671 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 RHOBTB1O94844 696 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 WISP3O95389 354 aaPredicted RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 LMNAP02545 664 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 CD1DP15813 335 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 PPM1AP35813 382 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 HK2P52789 917 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 NAA25Q14CX7 972 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 TYSND1Q2T9J0 566 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 INO80DQ53TQ3 878 aaPredicted RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 C6orf163Q5TEZ5 329 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 C1orf146Q5VVC0 180 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 AFTPHQ6ULP2 937 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 SLC22A9Q8IVM8 553 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 PIANPQ8IYJ0 282 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 APCDD1Q8J025 514 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 CFAP61Q8NHU2 1237 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 SHKBP1Q8TBC3 707 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 MARK4Q96L34 752 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 CATSPER2Q96P56 530 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 AARSD1Q9BTE6 412 aaKnown RBP7.56□□□□□ -1.2
IFT88-201ENST00000319980 TNFRSF12AQ9NP84 129 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.56□□□□□ -1.2
IFT88-201ENST00000319980 MICAL3Q7RTP6 2002 aa7.56□□□□□ -1.2
IFT88-201ENST00000319980 H3BMM5 538 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 LILRB3O75022 631 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CIB2O75838 187 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 OLFM2O95897 454 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 LRG1P02750 347 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 GNAZP19086 355 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 IMPDH1P20839 514 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SP100P23497 879 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 CDC25CP30307 473 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 MC4RP32245 332 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PTDSS1P48651 473 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 CDH13P55290 713 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SULT2A1Q06520 285 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PTPRNQ16849 979 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 ZRANB3Q5FWF4 1079 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PPM1LQ5SGD2 360 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 FAM219BQ5XKK7 198 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PSAPL1Q6NUJ1 521 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 NCEH1Q6PIU2 408 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PAQR3Q6TCH7 311 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 ZNF783Q6ZMS7 281 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 Q6ZNB5 142 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 RIPOR1Q6ZS17 1223 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CUZD1Q86UP6 607 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 BBS7Q8IWZ6 715 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 DEFB107AQ8IZN7 70 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PAF1Q8N7H5 531 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 LPGAT1Q92604 370 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PANX3Q96QZ0 392 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms