RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SLC9A6Q92581 669 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ST6GAL2Q96JF0 529 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 KATNAL1Q9BW62 490 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 APOL5Q9BWW9 433 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 POLR3BQ9NW08 1133 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PAK5Q9P286 719 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TEKT2Q9UIF3 430 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 BAG5Q9UL15 447 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 DERAQ9Y315 318 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PLLPQ9Y342 182 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 NRCAMQ92823 1304 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 HMX3A6NHT5 357 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TLR3O15455 904 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 BCAS1O75363 584 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PRKD3O94806 890 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PSAPP07602 524 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 GNAO1P09471 354 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TCF3P15923 654 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 JUNBP17275 347 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ATF7P17544 494 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 FGFR3P22607 806 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 EEF1B2P24534 225 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 DSG3P32926 999 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 EIF2DP41214 584 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF33AQ06730 810 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 SLC12A1Q13621 1099 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TDRD10Q5VZ19 366 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 FAM196AQ6ZSG2 479 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF767PQ75MW2 155 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TFAP2DQ7Z6R9 452 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 NOXA1Q86UR1 476 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PNPT1Q8TCS8 783 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TRPM4Q8TD43 1214 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 FOXJ1Q92949 421 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TBATAQ96M53 351 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 KLHL32Q96NJ5 620 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 DACH2Q96NX9 599 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 CDADC1Q9BWV3 514 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 SDCBP2Q9H190 292 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF385DQ9H6B1 395 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF556Q9HAH1 456 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PTPRHQ9HD43 1115 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 IPO11Q9UI26 975 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 SLCO3A1Q9UIG8 710 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PMF1-BGLAPU3KQ54 211 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 COL4A5P29400 1685 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 LOC100653049A0A140TA62 436 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 A0A1W2PRG6 482 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 KRT34O76011 436 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 BMP1P13497 986 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 CYP2A7P20853 494 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 KELP23276 732 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 SOX11P35716 441 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF280AP59817 542 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TGFB2P61812 414 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 LAMC2Q13753 1193 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TFDP2Q14188 446 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ELOAQ14241 798 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TRIM25Q14258 630 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF267Q14586 743 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 UGP2Q16851 508 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF181Q2M3W8 571 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PLEKHG6Q3KR16 790 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 LGSNQ5TDP6 509 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 KIAA1324Q6UXG2 1013 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ARHGAP36Q6ZRI8 547 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 LIMS2Q7Z4I7 341 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PRSS42Q7Z5A4 293 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 AMIGO1Q86WK6 493 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 CBWD2Q8IUF1 395 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 LGI2Q8N0V4 545 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TDRD5Q8NAT2 981 aaKnown RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ATAD1Q8NBU5 361 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 OR6Q1Q8NGQ2 317 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 OR2T34Q8NGX1 318 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 CYP2W1Q8TAV3 490 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 E2F7Q96AV8 911 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TBC1D20Q96BZ9 403 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TEKT5Q96M29 485 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 UHRF1Q96T88 793 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-201ENST00000316433 PAFAH2Q99487 392 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 C12orf57Q99622 126 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF670Q9BS34 389 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 RNPEPQ9H4A4 650 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 IPPQ9Y573 584 aa6.65□□□□□ -1.34
ZNF540-201ENST00000316433 TRAV20A0A0B4J274 112 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 PLD2O14939 933 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 CPNE3O75131 537 aaKnown RBP6.65□□□□□ -1.35
ZNF540-201ENST00000316433 NDUFS6O75380 124 aaKnown RBP6.65□□□□□ -1.35
ZNF540-201ENST00000316433 ZMPSTE24O75844 475 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 HMGCRP04035 888 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 MBL2P11226 248 aaPredicted RBP6.65□□□□□ -1.35
ZNF540-201ENST00000316433 STMN1P16949 149 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 UGT2B10P36537 528 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 SCNN1GP51170 649 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 AIF1P55008 147 aa6.65□□□□□ -1.35
ZNF540-201ENST00000316433 OR2B6P58173 313 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms