RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CLCQ05315 142 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 TRIM32Q13049 653 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 POU6F1Q14863 301 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 POLD3Q15054 466 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ACAP2Q15057 778 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 CTF1Q16619 201 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ESRP1Q6NXG1 681 aaKnown RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 DLK2Q6UY11 383 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 PNPLA1Q8N8W4 532 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 AGBL3Q8NEM8 1001 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 NRBF2Q96F24 287 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 SEPHS2Q99611 448 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ING2Q9H160 280 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ADNPQ9H2P0 1102 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ASB7Q9H672 318 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 SLC2A6Q9UGQ3 507 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ENPP5Q9UJA9 477 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 PCDHA9Q9Y5H5 950 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ERI2A8K979 691 aaKnown RBP10.88□□□□□ -0.67
ZNF558-201ENST00000301475 H0YAE9 185 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 ANGPT2O15123 496 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 TPD52L2O43399 206 aaKnown RBP10.88□□□□□ -0.67
ZNF558-201ENST00000301475 KPNA6O60684 536 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 LDLRP01130 860 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 MATKP42679 507 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 RBP5P82980 135 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 OCA2Q04671 838 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 CDH17Q12864 832 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 GEN1Q17RS7 908 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 TFAP2DQ7Z6R9 452 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 LRRC58Q96CX6 371 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 WDR12Q9GZL7 423 aaKnown RBP10.88□□□□□ -0.67
ZNF558-201ENST00000301475 EML4Q9HC35 981 aaKnown RBP10.88□□□□□ -0.67
ZNF558-201ENST00000301475 VTA1Q9NP79 307 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 ANKMY1Q9P2S6 941 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 ANAPC2Q9UJX6 822 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 PCDHGA11Q9Y5H2 935 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 ALOX5P09917 674 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 BMP4P12644 408 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 GRB7Q14451 532 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 CLPPQ16740 277 aaPredicted RBP10.88□□□□□ -0.67
ZNF558-201ENST00000301475 IMPG1Q17R60 797 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 TIGD2Q4W5G0 525 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 PRMT9Q6P2P2 845 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 PLEKHG7Q6ZR37 379 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 RAVER1Q8IY67 606 aaKnown RBP10.88□□□□□ -0.67
ZNF558-201ENST00000301475 PAPD5Q8NDF8 572 aaKnown RBP10.88□□□□□ -0.67
ZNF558-201ENST00000301475 TMEM125Q96AQ2 219 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 ALG2Q9H553 416 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 NTN4Q9HB63 628 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 GMIPQ9P107 970 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 DSEQ9UL01 958 aa10.88□□□□□ -0.67
ZNF558-201ENST00000301475 PEX10O60683 326 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 IFITM2Q01629 132 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 MAPRE1Q15691 268 aaKnown RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 MAPK11Q15759 364 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 UGP2Q16851 508 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 ZNF789Q5FWF6 425 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 ZNF470Q6ECI4 717 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 OTOP3Q7RTS5 596 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 LINC00523Q86TU6 105 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 TTC30BQ8N4P2 665 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 PDZD8Q8NEN9 1154 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 DNAJB14Q8TBM8 379 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 UPF1Q92900 1129 aaKnown RBP eCLIP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 TEX13BQ9BXU2 312 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 PIGVQ9NUD9 493 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 NDUFAF1Q9Y375 327 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 A6NL46 340 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 UPK1AO00322 258 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 PPP6CO00743 305 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 UGT2B11O75310 529 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 INMTO95050 263 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 HNRNPFP52597 415 aaKnown RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 NKX2-5P52952 324 aaPredicted RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 ARSFP54793 590 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 GP2P55259 537 aaKnown RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 SLCO6A1Q86UG4 719 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 PHYKPLQ8IUZ5 450 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 MINDY2Q8NBR6 621 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 SPATA22Q8NHS9 363 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 SEPT1Q8WYJ6 367 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 MUL1Q969V5 352 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 ALOXE3Q9BYJ1 711 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 MRM3Q9HC36 420 aaKnown RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 SLC52A3Q9NQ40 469 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 PCDHGA8Q9Y5G5 932 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 OAS3Q9Y6K5 1087 aaKnown RBP10.87□□□□□ -0.67
ZNF558-201ENST00000301475 PMF1-BGLAPU3KQ54 211 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 A0A087X1B8 175 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 ASPDHA6ND91 283 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 MAN1A2O60476 641 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 HUS1O60921 280 aa10.87□□□□□ -0.67
ZNF558-201ENST00000301475 CPB1P15086 417 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms