RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TRPM5Q9NZQ8 1165 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 RAP2CQ9Y3L5 183 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 APOA4P06727 396 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 CDKN1CP49918 316 aaPredicted RBP21.94■■□□□ 1.1
TPM4-201ENST00000300933 OXCT1P55809 520 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 SMARCB1Q12824 385 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 FBXO48Q5FWF7 155 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 RNF219Q5W0B1 726 aaPredicted RBP21.94■■□□□ 1.1
TPM4-201ENST00000300933 SEL1L3Q68CR1 1132 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 LENG8Q96PV6 779 aaPredicted RBP21.94■■□□□ 1.1
TPM4-201ENST00000300933 CINPQ9BW66 212 aaPredicted RBP21.94■■□□□ 1.1
TPM4-201ENST00000300933 MUC3BQ9H195 1237 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 GTSE1Q9NYZ3 720 aa21.94■■□□□ 1.1
TPM4-201ENST00000300933 PRRG1O14668 218 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 CCNT2O60583 730 aaKnown RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 RHOCP08134 193 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 SMIM18P0DKX4 95 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 ZXDBP98169 803 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 TWF1Q12792 350 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 SH2D4BQ5SQS7 431 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 ZNF549Q6P9A3 640 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 PAOXQ6QHF9 649 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 CATSPER2Q96P56 530 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 SIKE1Q9BRV8 207 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 GRIP2Q9C0E4 1043 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 UBA2Q9UBT2 640 aaPredicted RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 YIPF1Q9Y548 306 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 RANBP2P49792 3224 aaKnown RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 CLPTM1O96005 669 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 MT-CO1P00395 513 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 PMLP29590 882 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 ALDH1A3P47895 512 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 CALML6Q8TD86 181 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 BPIFA1Q9NP55 256 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 APPL1Q9UKG1 709 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 HDAC3O15379 428 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 CD3EAPO15446 510 aaKnown RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 CXCL10P02778 98 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 KPNA1P52294 538 aaPredicted RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 ZNF177Q13360 481 aaPredicted RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 IKBKEQ14164 716 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 TXNDC8Q6A555 127 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 KLHDC10Q6PID8 442 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 C2orf15Q8WU43 125 aaKnown RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 MRPL57Q9BQC6 102 aaKnown RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 FAM96AQ9H5X1 160 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 AFF4Q9UHB7 1163 aaKnown RBP21.93■■□□□ 1.1
TPM4-201ENST00000300933 DTNAQ9Y4J8 743 aa21.93■■□□□ 1.1
TPM4-201ENST00000300933 GPR39O43194 453 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 SLC7A4O43246 635 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 TFAP2AP05549 437 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 COL6A2P12110 1019 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 MZF1P28698 734 aaPredicted RBP21.92■■□□□ 1.1
TPM4-201ENST00000300933 FAM83EQ2M2I3 478 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 METTL25Q8N6Q8 603 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 EFHBQ8N7U6 833 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 RANBP9Q96S59 729 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 MFSD1Q9H3U5 465 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 LZTS1Q9Y250 596 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 UBA6A0AVT1 1052 aaPredicted RBP21.92■■□□□ 1.1
TPM4-201ENST00000300933 TMCC1O94876 653 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 GLP2RO95838 553 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 CDH4P55283 916 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 BTKQ06187 659 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 KLF10Q13118 480 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 GK3PQ14409 553 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 NADK2Q4G0N4 442 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 KIAA0408Q6ZU52 694 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 DNAJB7Q7Z6W7 309 aaPredicted RBP21.92■■□□□ 1.1
TPM4-201ENST00000300933 CARNMT1Q8N4J0 409 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 SNX31Q8N9S9 440 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 LPCAT1Q8NF37 534 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 OR4K2Q8NGD2 314 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 RDH11Q8TC12 318 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 FATE1Q969F0 183 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 TMEM169Q96HH4 297 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 MAGEH1Q9H213 219 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 PLK2Q9NYY3 685 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 UBAP1Q9NZ09 502 aa21.92■■□□□ 1.1
TPM4-201ENST00000300933 A0A087X1B8 175 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 C1RP00736 705 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 LTA4HP09960 611 aaKnown RBP21.91■■□□□ 1.1
TPM4-201ENST00000300933 TBL3Q12788 808 aaKnown RBP21.91■■□□□ 1.1
TPM4-201ENST00000300933 TECRLQ5HYJ1 363 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 ARL14EPQ8N8R7 260 aaPredicted RBP21.91■■□□□ 1.1
TPM4-201ENST00000300933 MDGA1Q8NFP4 955 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 OR6K2Q8NGY2 324 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 FEM1CQ96JP0 617 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 CNBD2Q96M20 576 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 STN1Q9H668 368 aaKnown RBP21.91■■□□□ 1.1
TPM4-201ENST00000300933 MID2Q9UJV3 735 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 FAM50BQ9Y247 325 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 DOCK6Q96HP0 2047 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 A8MT66 165 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 AIM2O14862 343 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 MBL2P11226 248 aaPredicted RBP21.91■■□□□ 1.1
TPM4-201ENST00000300933 CLCN5P51795 746 aa21.91■■□□□ 1.1
TPM4-201ENST00000300933 SH3BGRP55822 239 aaPredicted RBP21.91■■□□□ 1.1
TPM4-201ENST00000300933 CYTH1Q15438 398 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms