RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 CWH43Q9H720 699 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 ADAMTS6Q9UKP5 1117 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 A6NHS1 94 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 PRLP01236 227 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 ARSAP15289 507 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 OR4D1Q15615 310 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 TAF12Q16514 161 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 ZNF423Q2M1K9 1284 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 RNF219Q5W0B1 726 aaPredicted RBP19.96■□□□□ 0.79
CXCL16-201ENST00000293778 CLEC6AQ6EIG7 209 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 C16orf59Q7L2K0 433 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 RNF168Q8IYW5 571 aaPredicted RBP19.96■□□□□ 0.79
CXCL16-201ENST00000293778 PTGR2Q8N8N7 351 aaPredicted RBP19.96■□□□□ 0.79
CXCL16-201ENST00000293778 LPCAT1Q8NF37 534 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 MDGA1Q8NFP4 955 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 RNF38Q9H0F5 515 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 MUC3BQ9H195 1237 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 TRPC7Q9HCX4 862 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 TBC1D30Q9Y2I9 924 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 C2orf81A6NN90 581 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 GPC4O75487 556 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 RHOBTB1O94844 696 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 CXCL10P02778 98 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 CES1P23141 567 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 PKNOX1P55347 436 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 PLD1Q13393 1074 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 PPP1R3AQ16821 1122 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 RAB44Q7Z6P3 723 aaPredicted RBP19.95■□□□□ 0.78
CXCL16-201ENST00000293778 DEFB128Q7Z7B8 93 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 ZNF461Q8TAF7 563 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 RHEBL1Q8TAI7 183 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 USP13Q92995 863 aaPredicted RBP19.95■□□□□ 0.78
CXCL16-201ENST00000293778 MYRFLQ96LU7 910 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 VCX3BQ9H321 246 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 HIPK3Q9H422 1215 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 TFB2MQ9H5Q4 396 aaKnown RBP19.95■□□□□ 0.78
CXCL16-201ENST00000293778 CCDC189A1A4V9 331 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 H3BMM5 538 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 H3BNX3 289 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 CEACAM7Q14002 265 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 MAPRE2Q15555 327 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.95■□□□□ 0.78
CXCL16-201ENST00000293778 LPGAT1Q92604 370 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 WBP2Q969T9 261 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 SMIM14Q96QK8 99 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 KLF16Q9BXK1 252 aaPredicted RBP19.95■□□□□ 0.78
CXCL16-201ENST00000293778 MRPL1Q9BYD6 325 aaKnown RBP19.95■□□□□ 0.78
CXCL16-201ENST00000293778 CCDC68Q9H2F9 335 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 SYTL2Q9HCH5 934 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 PCDHGC4Q9Y5F7 938 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 RAI2Q9Y5P3 530 aa19.95■□□□□ 0.78
CXCL16-201ENST00000293778 C2orf78A6NCI8 922 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 UBXN8O00124 270 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 NDUFS3O75489 264 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 ABLIM3O94929 683 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 XRCC1P18887 633 aaPredicted RBP19.94■□□□□ 0.78
CXCL16-201ENST00000293778 FMO4P31512 558 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 DPP6P42658 865 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 ALDH1A3P47895 512 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 CDH13P55290 713 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 FLOT2Q14254 428 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 EML3Q32P44 896 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 TMEM154Q6P9G4 183 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 HMGCLL1Q8TB92 370 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 TMA16Q96EY4 203 aaKnown RBP19.94■□□□□ 0.78
CXCL16-201ENST00000293778 PPP1R12CQ9BZL4 782 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 UNC93B1Q9H1C4 597 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 TAS2R13Q9NYV9 303 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 YIPF1Q9Y548 306 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 PSMD12O00232 456 aaPredicted RBP19.94■□□□□ 0.78
CXCL16-201ENST00000293778 SRP72O76094 671 aaKnown RBP19.94■□□□□ 0.78
CXCL16-201ENST00000293778 F11P03951 625 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 STX5Q13190 355 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 FASTKQ14296 549 aaKnown RBP19.94■□□□□ 0.78
CXCL16-201ENST00000293778 PFKFB4Q16877 469 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 LRRC36Q1X8D7 754 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 LPCAT4Q643R3 524 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 CXorf57Q6NSI4 855 aaKnown RBP19.94■□□□□ 0.78
CXCL16-201ENST00000293778 GDPD5Q8WTR4 605 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 ASB2Q96Q27 587 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 ATOH8Q96SQ7 321 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 TCF12Q99081 682 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 DDX50Q9BQ39 737 aaKnown RBP19.94■□□□□ 0.78
CXCL16-201ENST00000293778 HSFX1Q9UBD0 423 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 BCAP29Q9UHQ4 241 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 FAM50BQ9Y247 325 aa19.94■□□□□ 0.78
CXCL16-201ENST00000293778 STX16-NPEPL1H3BU86 382 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 SIX3O95343 332 aaPredicted RBP19.93■□□□□ 0.78
CXCL16-201ENST00000293778 MTHFD2P13995 350 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 LPOP22079 712 aaPredicted RBP19.93■□□□□ 0.78
CXCL16-201ENST00000293778 ME2P23368 584 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 PSMA3P25788 255 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 ARF5P84085 180 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 GSTA3Q16772 222 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 FAM219BQ5XKK7 198 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 CAPRIN2Q6IMN6 1127 aaKnown RBP19.93■□□□□ 0.78
CXCL16-201ENST00000293778 PAQR3Q6TCH7 311 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 CYHR1Q6ZMK1 362 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 CLYBLQ8N0X4 340 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 ZBED2Q9BTP6 218 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms