RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 VPS37AQ8NEZ2 397 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SPACA7Q96KW9 195 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 HNRNPABQ99729 332 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CPNE1Q99829 537 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ZYG11BQ9C0D3 744 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 DUSP12Q9UNI6 340 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 PMF1-BGLAPU3KQ54 211 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SIGLEC16A6NMB1 481 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 BTN3A3O00478 584 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CRTAMO95727 393 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 S100A9P06702 114 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 BPGMP07738 259 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ERVK-10P10266 1014 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CCNB1P14635 433 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 TPH1P17752 444 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 PGAM1P18669 254 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 COPZ1P61923 177 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 TUBA4AP68366 448 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 TRAP1Q12931 704 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ZC3H12AQ5D1E8 599 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 RAP1GAP2Q684P5 730 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 FBXO30Q8TB52 745 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 GPR152Q8TDT2 470 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 RNFT2Q96EX2 444 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 LHX5Q9H2C1 402 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 RAD18Q9NS91 495 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 H3BSA7 217 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 KPNA3O00505 521 aaPredicted RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ENDOD1O94919 500 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SERPINA4P29622 427 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 GAD2Q05329 585 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 FAM183BPQ6ZVS7 135 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 GATAD2AQ86YP4 633 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 LRRC49Q8IUZ0 686 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ERI1Q8IV48 349 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CYP4X1Q8N118 509 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SNX31Q8N9S9 440 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 NSUN3Q9H649 340 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 MINDY3Q9H8M7 445 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SFXN1Q9H9B4 322 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 EGFL7Q9UHF1 273 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 LGALS13Q9UHV8 139 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SPEF1Q9Y4P9 236 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ERI2A8K979 691 aaKnown RBP11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 KRT6AP02538 564 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 RGS4P49798 205 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ABATP80404 500 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 TNK2Q07912 1038 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 NR6A1Q15406 480 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 PTRHD1Q6GMV3 140 aaKnown RBP11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 KCNMB4Q86W47 210 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC22A9Q8IVM8 553 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 C10orf82Q8WW14 230 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 TRIM8Q9BZR9 551 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ADAMTS10Q9H324 1103 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 GRHL1Q9NZI5 618 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 PNMA8BQ9ULN7 279 aaPredicted RBP11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 CCDC154A6NI56 674 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 NR2C2P49116 596 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 IST1P53990 364 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 TIMM50Q3ZCQ8 353 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ZRANB3Q5FWF4 1079 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 KLHDC9Q8NEP7 349 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 FAR1Q8WVX9 515 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ING5Q8WYH8 240 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ELMO1Q92556 727 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 NPAS2Q99743 824 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 R3HDMLQ9H3Y0 253 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 WDR55Q9H6Y2 383 aaPredicted RBP11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 NT5MQ9NPB1 228 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 GMIPQ9P107 970 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 MAFFQ9ULX9 164 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 POMPQ9Y244 141 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 TMED5Q9Y3A6 229 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 YIPF1Q9Y548 306 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 A0A1W2PQH9 124 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 GPR32O75388 356 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 JCHAINP01591 159 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 CHRNA1P02708 482 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 GALTP07902 379 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ITGALP20701 1170 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 PRIM2P49643 509 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC7A2P52569 658 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 CRADDP78560 199 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 DNAJB14Q8TBM8 379 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 PLD4Q96BZ4 506 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ZCCHC2Q9C0B9 1178 aaKnown RBP11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 MID1IP1Q9NPA3 183 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 LNPEPQ9UIQ6 1025 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 PPM1HQ9ULR3 514 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 AREL1O15033 823 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 GRM6O15303 877 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 AVILO75366 819 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 DNTTP04053 509 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 HNRNPA1P09651 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 TSHRP16473 764 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 C16orf62Q7Z3J2 963 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms