RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 UBFD1O14562 309 aaKnown RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 AIM2O14862 343 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 OR1I1O60431 355 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 CIB2O75838 187 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 SUPT7LO94864 414 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 ZNF37AP17032 561 aaPredicted RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 SP100P23497 879 aaPredicted RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 CDC25CP30307 473 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 CDH13P55290 713 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 CDH18Q13634 790 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 LAMB3Q13751 1172 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 OR4D1Q15615 310 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 GAREM2Q75VX8 874 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 CUZD1Q86UP6 607 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 SNX32Q86XE0 403 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 APCDD1Q8J025 514 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 NAT14Q8WUY8 206 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 NRG4Q8WWG1 115 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 RETREG1Q9H6L5 497 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 VPS51Q9UID3 782 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 CLEC4EQ9ULY5 219 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 ABHD14A-ACY1A0A1B0GW23 586 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 TRIM43BA6NCK2 446 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 SIX3O95343 332 aaPredicted RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 LMNAP02545 664 aaKnown RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 CLEC6AQ6EIG7 209 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 TPGS1Q6ZTW0 290 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 NET1Q7Z628 596 aaPredicted RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 TRIM43Q96BQ3 446 aaPredicted RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 PAWRQ96IZ0 340 aaKnown RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 AARSD1Q9BTE6 412 aaKnown RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 CRISPLD2Q9H0B8 497 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 LHX3Q9UBR4 397 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 PCDHB9Q9Y5E1 797 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 PLXNA4Q9HCM2 1894 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 UBXN8O00124 270 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 PPP6CO00743 305 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 TGM5O43548 720 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 LUC7L3O95232 432 aaKnown RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 CNPP09543 421 aaKnown RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 CTPS1P17812 591 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 LAG3P18627 525 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 RHOAP61586 193 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 BTKQ06187 659 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 TYSND1Q2T9J0 566 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 PAQR3Q6TCH7 311 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 FAM43BQ6ZT52 329 aaPredicted RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 DDX50Q9BQ39 737 aaKnown RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 SMG9Q9H0W8 520 aaKnown RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 GSTO2Q9H4Y5 243 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 STOML2Q9UJZ1 356 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 MED16Q9Y2X0 877 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 ARIH1Q9Y4X5 557 aaPredicted RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 CCDC189A1A4V9 331 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 SLCO1B7G3V0H7 640 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 SDHDO14521 159 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 SRP72O76094 671 aaKnown RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 RHOBTB1O94844 696 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 CKMP06732 381 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 OGNP20774 298 aaKnown RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 GKP32189 559 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 MC4RP32245 332 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 PPP1R3AQ16821 1122 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 SETMARQ53H47 684 aaPredicted RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 TCHHL1Q5QJ38 904 aaPredicted RBP19.25■□□□□ 0.67
BRAF-201ENST00000288602 TLDC1Q6P9B6 456 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 NCEH1Q6PIU2 408 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 HPS6Q86YV9 775 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 DDI1Q8WTU0 396 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 IKZF3Q9UKT9 509 aa19.25■□□□□ 0.67
BRAF-201ENST00000288602 SMAD6O43541 496 aaKnown RBP19.24■□□□□ 0.67
BRAF-201ENST00000288602 NDUFS3O75489 264 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 ALPIP09923 528 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 IMPDH1P20839 514 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 LPOP22079 712 aaPredicted RBP19.24■□□□□ 0.67
BRAF-201ENST00000288602 PPARGP37231 505 aaPredicted RBP19.24■□□□□ 0.67
BRAF-201ENST00000288602 PPP3CCP48454 512 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 ACTR3P61158 418 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 ZNF678Q5SXM1 525 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 MFN1Q8IWA4 741 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 LPGAT1Q92604 370 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 CCDC126Q96EE4 140 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 SLC30A3Q99726 388 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 CDH22Q9UJ99 828 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 ARHGAP26Q9UNA1 814 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 OR51B4Q9Y5P0 310 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 COPG1Q9Y678 874 aaKnown RBP19.24■□□□□ 0.67
BRAF-201ENST00000288602 ANKRD12Q6UB98 2062 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 CHD7Q9P2D1 2997 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 NUDT2P50583 147 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 PFKFB4Q16877 469 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 ZRANB3Q5FWF4 1079 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 AFTPHQ6ULP2 937 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.24■□□□□ 0.671e-6■■■■■ 92.8
BRAF-201ENST00000288602 SNX31Q8N9S9 440 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 HIPK4Q8NE63 616 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 BEGAINQ9BUH8 593 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 ADGRE3Q9BY15 652 aa19.24■□□□□ 0.67
BRAF-201ENST00000288602 OBSL1O75147 1896 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms