RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TRABD2AQ86V40 505 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 KLHL32Q96NJ5 620 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 GSDMCQ9BYG8 508 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 BRD9Q9H8M2 597 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 C3orf14Q9HBI5 128 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 MAP10Q9P2G4 905 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PRODHO43272 600 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PSIP1O75475 530 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TRMUO75648 421 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TRBC1P01850 177 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 BPGMP07738 259 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TFEBP19484 476 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SLC5A9Q2M3M2 681 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TMEM192Q8IY95 271 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ADGRG2Q8IZP9 1017 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 ANKRD52Q8NB46 1076 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SUSD6Q92537 303 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 PANX1Q96RD7 426 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 SMPD3Q9NY59 655 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 NUDT4Q9NZJ9 180 aa7.98□□□□□ -1.13
LIMD1-201ENST00000273317 GNEQ9Y223 722 aaKnown RBP7.98□□□□□ -1.13
LIMD1-201ENST00000273317 TNS2Q63HR2 1409 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 COL1A2P08123 1366 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PNLIPRP1P54315 467 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 NAGLUP54802 743 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 RBBP4Q09028 425 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ZIK1Q3SY52 487 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SLC30A10Q6XR72 485 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 GIPC3Q8TF64 312 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PDCD2LQ9BRP1 358 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ALDH4A1P30038 563 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CUZD1Q86UP6 607 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 OR2T12Q8NG77 320 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 NAT14Q8WUY8 206 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 KBTBD7Q8WVZ9 684 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ROPN1LQ96C74 230 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 TRPV5Q9NQA5 729 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 EXD2Q9NVH0 621 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 METTL21EPA6NDL7 271 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FAM86B1E9PN63 330 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SLC28A2O43868 658 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ORC5O43913 435 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 RECQL4O94761 1208 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FAM86B2P0C5J1 330 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 UROSP10746 265 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 AP5B1Q2VPB7 878 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 BRMS1LQ5PSV4 323 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 THOC7Q6I9Y2 204 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FAM171BQ6P995 826 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CNSTQ6PJW8 725 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PRR23BQ6ZRT6 265 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ZBTB46Q86UZ6 589 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SLITRK4Q8IW52 837 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 GPALPP1Q8IXQ4 340 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FAM98AQ8NCA5 519 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 LRRN4CLQ8ND94 238 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 DNAJB14Q8TBM8 379 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 B3GALT6Q96L58 329 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FTHL17Q9BXU8 183 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FAM50BQ9Y247 325 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 DERAQ9Y315 318 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SETD1AO15047 1707 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ASTN1O14525 1302 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 KCNQ2O43526 872 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 NRP2O60462 931 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CABYRO75952 493 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 IGFBP5P24593 272 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PLET1Q6UQ28 207 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 C1orf186Q6ZWK4 172 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ILDR1Q86SU0 546 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 GTPBP1O00178 669 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 IFNA6P05013 189 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 GSTT2BP0CG30 244 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MTHFRP42898 656 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MARSP56192 900 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ABATP80404 500 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SMARCB1Q12824 385 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PTPRNQ16849 979 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 TMEM44Q2T9K0 475 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FAM46CQ5VWP2 391 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CWF19L1Q69YN2 538 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 UNC5AQ6ZN44 842 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PARP8Q8N3A8 854 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MAF1Q9H063 256 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 IL25Q9H293 177 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ABHD16BQ9H3Z7 469 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SCELO95171 688 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PGRP06401 933 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PSMA1P25786 263 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 KLRK1P26718 216 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 HTR1BP28222 390 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PFKPQ01813 784 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PRR23CQ6ZRP0 262 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 OR4L1Q8NH43 312 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 BTBD9Q96Q07 612 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 IL1RAPQ9NPH3 570 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 FBXO6Q9NRD1 293 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 LGALS13Q9UHV8 139 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 F8VP50 259 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms