RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 ETFBKMTQ8IXQ9 262 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 OR2A12Q8NGT7 310 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 ATP13A3Q9H7F0 1226 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
SDE2-201ENST00000272091 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
SDE2-201ENST00000272091 VWA7Q9Y334 891 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 TGDSO95455 350 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 HMGCLP35914 325 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 MAPK8P45983 427 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
SDE2-201ENST00000272091 SEMG2Q02383 582 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 TAF1BQ53T94 588 aaPredicted RBP12.11□□□□□ -0.47
SDE2-201ENST00000272091 CARD16Q5EG05 197 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 MRNIPQ6NTE8 343 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 AHI1Q8N157 1196 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 PCDH20Q8N6Y1 951 aaKnown RBP12.11□□□□□ -0.47
SDE2-201ENST00000272091 KIAA1958Q8N8K9 716 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 SMARCD2Q92925 531 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 CDCA3Q99618 268 aaPredicted RBP12.11□□□□□ -0.47
SDE2-201ENST00000272091 SLC2A11Q9BYW1 496 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 MTG2Q9H4K7 406 aa12.11□□□□□ -0.47
SDE2-201ENST00000272091 A0A087X1B8 175 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 CAPN8A6NHC0 703 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 NPIPB15A6NHN6 443 aaPredicted RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 TTC34A8MYJ7 566 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 SLC9A3R1O14745 358 aaPredicted RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 SUOXP51687 545 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 TRIM42Q8IWZ5 723 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 BIRC8Q96P09 236 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 CPEB1Q9BZB8 566 aaKnown RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 SLC28A3Q9HAS3 691 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 ACSS2Q9NR19 701 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 DZANK1Q9NVP4 752 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 HACD3Q9P035 362 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 TNRC18O15417 2968 aaPredicted RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 SLC6A11P48066 632 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 EPHB1P54762 984 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 STX3Q13277 289 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 GALNTL6Q49A17 601 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 ATG16L1Q676U5 607 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 NAIF1Q69YI7 327 aaPredicted RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 ZYG11AQ6WRX3 759 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 SFTPA1Q8IWL2 248 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 RYBPQ8N488 228 aaPredicted RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 BPIFB1Q8TDL5 484 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 TUBGCP5Q96RT8 1024 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 AARSD1Q9BTE6 412 aaKnown RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 EBF3Q9H4W6 596 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 TRPV4Q9HBA0 871 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 HPS4Q9NQG7 708 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 INTS10Q9NVR2 710 aaKnown RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 XPR1Q9UBH6 696 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 DCTN4Q9UJW0 460 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 PPIL1Q9Y3C6 166 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 CEP290O15078 2479 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 WASH3PC4AMC7 463 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 BNIP3LO60238 219 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 OR1I1O60431 355 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 CLDN7O95471 211 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 NEFHP12036 1026 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 ITGA9Q13797 1035 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 LACTB2Q53H82 288 aaPredicted RBP12.1□□□□□ -0.47
SDE2-201ENST00000272091 LCA5Q86VQ0 697 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 NXPE3Q969Y0 559 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 FAM83CQ9BQN1 747 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 ZDHHC6Q9H6R6 413 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 OXSMQ9NWU1 459 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 GALPQ9UBC7 116 aa12.1□□□□□ -0.47
SDE2-201ENST00000272091 HEPACAM2A8MVW5 462 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 STX7O15400 261 aaKnown RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 SERPINE1P05121 402 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 CTSLP07711 333 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 SERPINA4P29622 427 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 SULT2A1Q06520 285 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 ACCSLQ4AC99 568 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 TECRLQ5HYJ1 363 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 CTSL3PQ5NE16 218 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 FAM45BPQ6NSW5 357 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 ANKRD54Q6NXT1 300 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 FAM45AQ8TCE6 357 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 LYSMD1Q96S90 227 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 PLA2G2FQ9BZM2 168 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 CCDC85CA6NKD9 419 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 RALBP11234 206 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 SLC1A6P48664 564 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 CSHL1Q14406 222 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 VITQ6UXI7 678 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 GRIN3AQ8TCU5 1115 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 CHFRQ96EP1 664 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 SUV39H2Q9H5I1 410 aa12.09□□□□□ -0.47
SDE2-201ENST00000272091 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
SDE2-201ENST00000272091 A8MX80 341 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms