RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 VPS33AQ96AX1 596 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 SLC9A7Q96T83 725 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 RUBCNLQ9H714 662 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 ACTR8Q9H981 624 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 PTGESO14684 152 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 GATMP50440 423 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 AIF1P55008 147 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 ARMC12Q5T9G4 340 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 DLG3Q92796 817 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 MS4A4AQ96JQ5 239 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 ZNF558Q96NG5 402 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 J3KR12 359 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 JUNP05412 331 aaKnown RBP19.83■□□□□ 0.77
CSPG5-201ENST00000264723 SLC2A4P14672 509 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 GSSP48637 474 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 PRKAA2P54646 552 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 SEMG2Q02383 582 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 SLC10A7Q0GE19 358 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 CEACAM7Q14002 265 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 ADGRE1Q14246 886 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 SQLEQ14534 574 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 TAZQ16635 292 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 TTLL9Q3SXZ7 439 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 MARCH8Q5T0T0 291 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 CBR4Q8N4T8 237 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 TXNDC5Q8NBS9 432 aaKnown RBP19.83■□□□□ 0.77
CSPG5-201ENST00000264723 FBXO30Q8TB52 745 aa19.83■□□□□ 0.77
CSPG5-201ENST00000264723 EVPLQ92817 2033 aa19.83■□□□□ 0.76
CSPG5-201ENST00000264723 CLIC3O95833 236 aa19.83■□□□□ 0.76
CSPG5-201ENST00000264723 ECT2LQ008S8 904 aa19.83■□□□□ 0.76
CSPG5-201ENST00000264723 CES4AQ5XG92 561 aa19.83■□□□□ 0.76
CSPG5-201ENST00000264723 C1orf21Q9H246 121 aa19.83■□□□□ 0.76
CSPG5-201ENST00000264723 AGO1Q9UL18 857 aaKnown RBP19.83■□□□□ 0.76
CSPG5-201ENST00000264723 OR6C75A6NL08 312 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 C1RP00736 705 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 UGT1A6P19224 532 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 REP15Q6BDI9 236 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 UGT3A1Q6NUS8 523 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 FAM126BQ8IXS8 530 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 TSPAN18Q96SJ8 248 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 PTGDR2Q9Y5Y4 395 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 SMIM31A0A1B0GVY4 71 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 CCDC154A6NI56 674 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 NR4A1P22736 598 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 HSPA14Q0VDF9 509 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 TRAF2Q12933 501 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 CYP4V2Q6ZWL3 525 aaPredicted RBP19.82■□□□□ 0.76
CSPG5-201ENST00000264723 OTOP2Q7RTS6 562 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 RTP4Q96DX8 246 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 ZFRQ96KR1 1074 aaKnown RBP19.82■□□□□ 0.76
CSPG5-201ENST00000264723 ASB8Q9H765 288 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 ZNF865P0CJ78 1059 aaPredicted RBP19.82■□□□□ 0.76
CSPG5-201ENST00000264723 LBPP18428 481 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 CORO1AP31146 461 aaKnown RBP19.82■□□□□ 0.76
CSPG5-201ENST00000264723 MTTPP55157 894 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 TLR1Q15399 786 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 RASAL3Q86YV0 1011 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 RDH11Q8TC12 318 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 CANT1Q8WVQ1 401 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 DNAJB4Q9UDY4 337 aa19.82■□□□□ 0.76
CSPG5-201ENST00000264723 URB1O60287 2271 aaKnown RBP19.82■□□□□ 0.76
CSPG5-201ENST00000264723 DHRS12A0PJE2 317 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 AZIN1O14977 448 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 MATN3O15232 486 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 GABBR2O75899 941 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 CLCN5P51795 746 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 CCNG1P51959 295 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 MS4A2Q01362 244 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 TRIM25Q14258 630 aaKnown RBP19.81■□□□□ 0.76
CSPG5-201ENST00000264723 PAFAH1B3Q15102 231 aaKnown RBP19.81■□□□□ 0.76
CSPG5-201ENST00000264723 GPR107Q5VW38 600 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 PHC3Q8NDX5 983 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 C19orf60Q96EN9 201 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 PPM1MQ96MI6 270 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 MRPL17Q9NRX2 175 aaKnown RBP19.81■□□□□ 0.76
CSPG5-201ENST00000264723 PCDHB8Q9UN66 801 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 SLC45A1Q9Y2W3 748 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 KANSL1LA0AUZ9 987 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 SYNDIG1LA6NDD5 238 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 H3BSA7 217 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 GABRR2P28476 465 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 ADARP55265 1226 aaKnown RBP19.81■□□□□ 0.76
CSPG5-201ENST00000264723 ELMSAN1Q6PJG2 1045 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 IL27RAQ6UWB1 636 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 ZNF276Q8N554 614 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 AUTS2Q8WXX7 1259 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 ZFP14Q9HCL3 533 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 NUP205Q92621 2012 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 CCNCP24863 283 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 PPP1R8Q12972 351 aaKnown RBP19.81■□□□□ 0.76
CSPG5-201ENST00000264723 ATP1A4Q13733 1029 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 DET1Q7L5Y6 550 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 DHRSXQ8N5I4 330 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 ADCY4Q8NFM4 1077 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 OR13C4Q8NGS5 318 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.81■□□□□ 0.76
CSPG5-201ENST00000264723 CCSER2Q9H7U1 834 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 PCDHGB4Q9UN71 923 aa19.81■□□□□ 0.76
CSPG5-201ENST00000264723 MTF2Q9Y483 593 aaPredicted RBP19.81■□□□□ 0.76
CSPG5-201ENST00000264723 LRRC14BA6NHZ5 514 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms