RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TULP3O75386 442 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 ATP6AP2O75787 350 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 HPRP00739 348 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 KCNA5P22460 613 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 PLA2G16P53816 162 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 NFKB2Q00653 900 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 NFYCQ13952 458 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 POU6F1Q14863 301 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC14A2Q15849 920 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 INAQ16352 499 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF678Q5SXM1 525 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 CHST15Q7LFX5 561 aaPredicted RBP12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 PIGZQ86VD9 579 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 ANKRD13BQ86YJ7 626 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 PIK3C3Q8NEB9 887 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC2A14Q8TDB8 520 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 USP33Q8TEY7 942 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 TMEM125Q96AQ2 219 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 SDCCAG3Q96C92 435 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 KLHL25Q9H0H3 589 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 ADNPQ9H2P0 1102 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 FBRSL1Q9HCM7 1045 aaKnown RBP12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 SDR39U1Q9NRG7 319 aaPredicted RBP12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 PIGVQ9NUD9 493 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 TBC1D4O60343 1298 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 BCAS1O75363 584 aaPredicted RBP12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 C22orf31O95567 290 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 THRBP10828 461 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 CAPN3P20807 821 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 CRHBPP24387 322 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 HTR1EP28566 365 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 AXLP30530 894 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 HPCAL1P37235 193 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 HNRNPFP52597 415 aaKnown RBP12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 MAPK10P53779 464 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 LIPEQ05469 1076 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 DAG1Q14118 895 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 CAPRIN1Q14444 709 aaKnown RBP12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 CRY1Q16526 586 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 CLEC6AQ6EIG7 209 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 ARMCX2Q7L311 632 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 SPARTQ8N0X7 666 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 KCTD13Q8WZ19 329 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 BTN2A3PQ96KV6 586 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 FCRL5Q96RD9 977 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 HGH1Q9BTY7 390 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 CHID1Q9BWS9 393 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 DUSP16Q9BY84 665 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 RMND5AQ9H871 391 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 ANKMY1Q9P2S6 941 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 FBXW11Q9UKB1 542 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 AKT3Q9Y243 479 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 A0A1W2PP18 115 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 SOWAHBA6NEL2 793 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 KATNA1O75449 491 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 F9P00740 461 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 NPPAP01160 153 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ELK4P28324 431 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 IDUAP35475 653 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 GSSP48637 474 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ARSFP54793 590 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 TPD52P55327 224 aaPredicted RBP12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 KCNK10P57789 538 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 HERVK_113P63132 956 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 TRIP11Q15643 1979 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 UGT3A2Q3SY77 523 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 IQSEC1Q6DN90 963 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 THOC7Q6I9Y2 204 aaKnown RBP12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 SPATA19Q7Z5L4 167 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 CADM3Q8N126 398 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF555Q8NEP9 628 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 HPS1Q92902 700 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 UBXN10Q96LJ8 280 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 LPIN3Q9BQK8 851 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ERVK-6Q9BXR3 956 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ENPP5Q9UJA9 477 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF112Q9UJU3 913 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 BAG5Q9UL15 447 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ERVK-11Q9UQG0 969 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 PCDHGA11Q9Y5H2 935 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 FAM72CH0Y354 149 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 KCNH1O95259 989 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 MT-CO1P00395 513 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 CDH1P12830 882 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ARSAP15289 507 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ARNTP27540 789 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 PLK1P53350 603 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 PHKG1Q16816 387 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 GEN1Q17RS7 908 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 FAM72AQ5TYM5 149 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 FAM72DQ6L9T8 149 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC2A7Q6PXP3 512 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 R3HCC1LQ7Z5L2 792 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms