RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 FEM1CQ96JP0 617 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 HMGB3O15347 200 aaKnown RBP16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 EPHX1P07099 455 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 CCNYL3P0C7X3 344 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 UXS1Q8NBZ7 420 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 ALG3Q92685 438 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 PWWP2AQ96N64 755 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 OR52E6Q96RD3 313 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 ZNF184Q99676 751 aaPredicted RBP16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 AIF1LQ9BQI0 150 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 PTPRJQ12913 1337 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 A0A0U1RQJ8 604 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 H3BM21 787 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 TPP2P29144 1249 aaPredicted RBP16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 SPAM1P38567 509 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 FAAH2Q6GMR7 532 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 CERS6Q6ZMG9 384 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 FUKQ8N0W3 1084 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 RNASE11Q8TAA1 199 aaKnown RBP16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 SESN1Q9Y6P5 492 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 CST3P01034 146 aaPredicted RBP16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 CCNA2P20248 432 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 FGFR3P22607 806 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 PSMD8P48556 350 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 SPESP1Q6UW49 350 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 C10orf107Q8IVU9 208 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 DEPDC4Q8N2C3 294 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 AARSD1Q9BTE6 412 aaKnown RBP16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 FNDC11Q9BVV2 318 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 SEZ6LQ9BYH1 1024 aa16.85■□□□□ 0.29
CROCCP3-201ENST00000263511 CAPN1P07384 714 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 MBTD1Q05BQ5 628 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 RHBDF2Q6PJF5 856 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 IZUMO1Q8IYV9 350 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 FBXW8Q8N3Y1 598 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 CCDC185Q8N715 623 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 KCTD15Q96SI1 283 aaPredicted RBP16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 PCDHGC3Q9UN70 934 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 RNASEH2AO75792 299 aaKnown RBP16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 SERPINA6P08185 405 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 PRG2P13727 222 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 EPHA3P29320 983 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 CDH4P55283 916 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 NRF1Q16656 503 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 KIAA0408Q6ZU52 694 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 GULP1Q9UBP9 304 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 ERVW-1Q9UQF0 538 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 GMPPBQ9Y5P6 360 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 A0A1B0GVM2 712 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 ATP6AP2A0A1C7CYW4 349 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 TCAF2A6NFQ2 919 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 MFSD11O43934 449 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 LGR5O75473 907 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 ATP6AP2O75787 350 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 UGT2B15P54855 530 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 CMC1Q7Z7K0 106 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 HNRNPABQ99729 332 aaKnown RBP16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 HBS1LQ9Y450 684 aaKnown RBP16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 GPR25O00155 361 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 WNT7AO00755 349 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 CAPN15O75808 1086 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 ZMPSTE24O75844 475 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 LRATO95237 230 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 CCNCP24863 283 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 USP46P62068 366 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 DCUN1D5Q9BTE7 237 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 MRTO4Q9UKD2 239 aaKnown RBP16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 MFHAS1Q9Y4C4 1052 aa16.84■□□□□ 0.29
CROCCP3-201ENST00000263511 SRRM3A6NNA2 597 aaPredicted RBP16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 MGRN1O60291 552 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 UNC5CO95185 931 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 STBD1O95210 358 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 IL6P05231 212 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 CDH13P55290 713 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 RFWD3Q6PCD5 774 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 ENKURQ8TC29 256 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 SNX27Q96L92 541 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 SGK2Q9HBY8 427 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 PRDM8Q9NQV8 689 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 STXBP5LQ9Y2K9 1186 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 ARL5CA6NH57 179 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 PIAS1O75925 651 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 EOMESO95936 686 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 VIPP01282 170 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 PTPN2P17706 415 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 RNASEH2BQ5TBB1 312 aaKnown RBP16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 ARHGAP36Q6ZRI8 547 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 OTOP3Q7RTS5 596 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 GRIP2Q9C0E4 1043 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 IKZF4Q9H2S9 585 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 TRAF6Q9Y4K3 522 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.29
CROCCP3-201ENST00000263511 TRAFD1O14545 582 aaPredicted RBP16.83■□□□□ 0.28
CROCCP3-201ENST00000263511 SLC6A2P23975 617 aa16.83■□□□□ 0.28
CROCCP3-201ENST00000263511 BUD31P41223 144 aaPredicted RBP16.83■□□□□ 0.28
CROCCP3-201ENST00000263511 MANFP55145 182 aaKnown RBP16.83■□□□□ 0.28
CROCCP3-201ENST00000263511 CACNG1Q06432 222 aa16.83■□□□□ 0.28
CROCCP3-201ENST00000263511 SF1Q15637 639 aaKnown RBP16.83■□□□□ 0.28
CROCCP3-201ENST00000263511 DENND6AQ8IWF6 608 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms