RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
TMEM260-201ENST00000261556 DISP2A7MBM2 1401 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 SNAP29O95721 258 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 IL7P13232 177 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 CYP4B1P13584 511 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 TGM2P21980 687 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 CRADDP78560 199 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 FKBP1CQ5VVH2 108 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 ZDHHC13Q8IUH4 622 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 TNFRSF25Q93038 417 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 AP3M1Q9Y2T2 418 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 PPME1Q9Y570 386 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 C3orf70A6NLC5 250 aaPredicted RBP12.99□□□□□ -0.33
TMEM260-201ENST00000261556 PLOD3O60568 738 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 TRIM13O60858 407 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 KCNJ13O60928 360 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 CYBBP04839 570 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 ZNF286BP0CG31 522 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 CYP3A5P20815 502 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 CHRNB3Q05901 458 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 PPP1R8Q12972 351 aaKnown RBP12.99□□□□□ -0.33
TMEM260-201ENST00000261556 GALEQ14376 348 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
TMEM260-201ENST00000261556 INSCQ1MX18 579 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 BHLHB9Q6PI77 547 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 SPESP1Q6UW49 350 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 LYPD8Q6UX82 237 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 THAP5Q7Z6K1 395 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 TRAPPC12Q8WVT3 735 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 ZNF285Q96NJ3 590 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 KCNS3Q9BQ31 491 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 IER2Q9BTL4 223 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 WASH6PQ9NQA3 447 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 ABCG2Q9UNQ0 655 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 MAU2Q9Y6X3 613 aa12.99□□□□□ -0.33
TMEM260-201ENST00000261556 ATP6AP2A0A1C7CYW4 349 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 ATP6AP2O75787 350 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 RPS3P23396 243 aaKnown RBP eCLIP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 SLC26A2P50443 739 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 SRP54P61011 504 aaKnown RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 PGM2L1Q6PCE3 622 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 DNERQ8NFT8 737 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 HERVK_113Q902F9 699 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 CHMP1AQ9HD42 196 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 LSM7Q9UK45 103 aaKnown RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 PDE10AQ9Y233 779 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 PRKAB1Q9Y478 270 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 FCGR1AP12314 374 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 PTPRAP18433 802 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 CFL1P23528 166 aaKnown RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 NRLP54845 237 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 TFDP3Q5H9I0 405 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 TPRG1LQ5T0D9 272 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 CHMP1BQ7LBR1 199 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 RASAL3Q86YV0 1011 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 FEZF2Q8TBJ5 459 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 TRNT1Q96Q11 434 aaKnown RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 SSU72Q9NP77 194 aaKnown RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 USE1Q9NZ43 259 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 CD40LGP29965 261 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 TM4SF1P30408 202 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 SLC15A1P46059 708 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 CDK10Q15131 360 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 GOLGA7BQ2TAP0 167 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 R3HCC1LQ7Z5L2 792 aaKnown RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 CLYBLQ8N0X4 340 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 DNAJB14Q8TBM8 379 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 SLC5A11Q8WWX8 675 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 EGFL8Q99944 293 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 DDIT4Q9NX09 232 aa12.98□□□□□ -0.33
TMEM260-201ENST00000261556 AFF4Q9UHB7 1163 aaKnown RBP12.98□□□□□ -0.33
TMEM260-201ENST00000261556 KDM4BO94953 1096 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 STAG3L1P0CL83 205 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 KELP23276 732 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 HNF1BP35680 557 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 PNPLA4P41247 253 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 GPR85P60893 370 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 NCS1P62166 190 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 PCDH1Q08174 1060 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 NPTX1Q15818 432 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 MSS51Q4VC12 460 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 PPM1JQ5JR12 505 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 TYW3Q6IPR3 259 aaKnown RBP12.97□□□□□ -0.33
TMEM260-201ENST00000261556 DCAKDQ8WVC6 231 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 PAWRQ96IZ0 340 aaKnown RBP12.97□□□□□ -0.33
TMEM260-201ENST00000261556 MCMBPQ9BTE3 642 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 ABHD16BQ9H3Z7 469 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 SLA2Q9H6Q3 261 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 RAPGEFL1Q9UHV5 662 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 RIMS3Q9UJD0 308 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 SLC9A8Q9Y2E8 581 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 U3KQV3 271 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 MYH11P35749 1972 aa12.97□□□□□ -0.33
TMEM260-201ENST00000261556 SLITRK3O94933 977 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms