RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PCDH18Q9HCL0 1135 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 YDJCA8MPS7 323 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 UGT2B11O75310 529 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 RECQL4O94761 1208 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CKMT2P17540 419 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 AQP1P29972 269 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CTSKP43235 329 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 ENTPD1P49961 510 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CD83Q01151 205 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CLEC6AQ6EIG7 209 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 LIN54Q6MZP7 749 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 GPR65Q8IYL9 337 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CENPSQ8N2Z9 138 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF317Q96PQ6 595 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 PANX3Q96QZ0 392 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CNPPD1Q9BV87 410 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 C8orf4Q9NR00 106 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 MAGEL2Q9UJ55 1249 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 PRAMEF33A0A0G2JMD5 474 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 OR10H3O60404 316 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 PRAMEF10O60809 474 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CHRM5P08912 532 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 TUBA3EQ6PEY2 450 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 UBR7Q8N806 425 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 RAB2BQ8WUD1 216 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 P2RY11Q96G91 374 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 Q96MT0 163 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC9A7Q96T83 725 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 HOPXQ9BPY8 73 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 LRCH4O75427 683 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PIRTP0C851 137 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 ACSM2AQ08AH3 577 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 NOMO1Q15155 1222 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 ACSM2BQ68CK6 577 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 C11orf24Q96F05 449 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 SMARCD1Q96GM5 515 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 FAXDC2Q96IV6 333 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 VAT1Q99536 393 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 GNPTGQ9UJJ9 305 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 KAT6AQ92794 2004 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 MYOCOSA0A1B0GUC4 107 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 OR6C70A6NIJ9 312 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 A8MV72 311 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 KPNA5O15131 536 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 UGT2B4P06133 528 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 C2P06681 752 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF806P0C7X5 589 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PRG2P13727 222 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 IDO1P14902 403 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 GDF10P55107 478 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 IL2P60568 153 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 SCN1BQ07699 218 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 CTXN3Q4LDR2 81 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 BSNDQ8WZ55 320 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 CENPNQ96H22 339 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 CDT1Q9H211 546 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 SNCAIPQ9Y6H5 919 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PDLIM1O00151 329 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 CLDN5O00501 218 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 SNX4O95219 450 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 HPCAL1P37235 193 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 MAZP56270 477 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 SKIV2LQ15477 1246 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 OVOS1Q6IE37 1185 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 SYCE2Q6PIF2 218 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PAOXQ6QHF9 649 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 C6orf89Q6UWU4 347 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 FAM83AQ86UY5 434 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 C12orf50Q8NA57 414 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 RDH11Q8TC12 318 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 OR52E6Q96RD3 313 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNHIT2Q9UHR6 403 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PHF11Q9UIL8 331 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 CHURC1-FNTBB4DL54 471 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 RLN1P04808 185 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 YWHAQP27348 245 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 MAXP61244 160 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 GBE1Q04446 702 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 LIPEQ05469 1076 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 ARL13AQ5H913 290 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 LCN1P1Q5VSP4 162 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 WSCD1Q658N2 575 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PIGZQ86VD9 579 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PHC2Q8IXK0 858 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 CLYBLQ8N0X4 340 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 SMYD1Q8NB12 490 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 VMP1Q96GC9 406 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 ARL15Q9NXU5 204 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PPP2R3BQ9Y5P8 575 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 CLUHO75153 1309 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 MYH10P35580 1976 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 FUT4P22083 530 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 RPS12P25398 132 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PRKAG1P54619 331 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 COMMD2Q86X83 199 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PNPT1Q8TCS8 783 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 PPP1R14AQ96A00 147 aa9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 RBM4BQ9BQ04 359 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 RBM4Q9BWF3 364 aaKnown RBP9.74□□□□□ -0.85
CTDSPL2-201ENST00000260327 NOCTQ9UK39 431 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms