RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 MMP20O60882 483 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 NUP62P37198 522 aaPredicted RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 LRP8Q14114 963 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 CCDC153Q494R4 210 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 FAM220AQ7Z4H9 259 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 KRT73Q86Y46 540 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 IL22RA1Q8N6P7 574 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 OR52L1Q8NGH7 329 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 SGSM3Q96HU1 749 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 A0A0A0MRY4 1105 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 SIN3BO75182 1162 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 PKNOX1P55347 436 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 PLEKHG4Q58EX7 1191 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 RNASE12Q5GAN4 147 aaKnown RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 LRIG3Q6UXM1 1119 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 SPATA13Q96N96 652 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 KAT6AQ92794 2004 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 CLDN11O75508 207 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 SPATA31C1P0DKV0 1188 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 PSMC3P17980 439 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 GCNT1Q02742 428 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 PCDH20Q8N6Y1 951 aaKnown RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 MAP4K5Q9Y4K4 846 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 PNMA8CA0A1B0GUJ8 204 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 PTGES3LE9PB15 166 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 IL33O95760 270 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ALPIP09923 528 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 PSMG2Q969U7 264 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SNX27Q96L92 541 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SH3GL1Q99961 368 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 RBCK1Q9BYM8 510 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 GRIN2DO15399 1336 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 HNRNPCP07910 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
SORT1-201ENST00000256637 PSMB9P28065 219 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 RNF19BQ6ZMZ0 732 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 PACS2Q86VP3 889 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 RBFAQ8N0V3 343 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 NLGN4XQ8N0W4 816 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 HDAC7Q8WUI4 952 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 COQ7Q99807 217 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 PDE5AO76074 875 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SPIBQ01892 262 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 TOP3AQ13472 1001 aaPredicted RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 AKIRIN2Q53H80 203 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 FAM13CQ8NE31 585 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 FBXO25Q8TCJ0 367 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 CLEC4DQ8WXI8 215 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SPATA9Q9BWV2 254 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ROPN1BQ9BZX4 212 aaPredicted RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 BTBD1Q9H0C5 482 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ROPN1Q9HAT0 212 aaPredicted RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 ING3Q9NXR8 418 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SMAPO00193 183 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 DLGAP3O95886 979 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 AHCYP23526 432 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SPAM1P38567 509 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 PLA2G16P53816 162 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 CDK18Q07002 472 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 PPP1R15BQ5SWA1 713 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ARMC8Q8IUR7 673 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SLC24A3Q9HC58 644 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 MRPS30Q9NP92 439 aaKnown RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 KLC4Q9NSK0 619 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ZNF490Q9ULM2 529 aaPredicted RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 ANKRD6Q9Y2G4 727 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 MICAL3Q7RTP6 2002 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ATP6AP2A0A1C7CYW4 349 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 C9J4A7 227 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 H3BMM5 538 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SYN3O14994 580 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ATP6AP2O75787 350 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 H2AFXP16104 143 aaPredicted RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 CAMK1Q14012 370 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 UBE2J2Q8N2K1 259 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SMYD1Q8NB12 490 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 SIDT2Q8NBJ9 832 aaKnown RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 OR10Q1Q8NGQ4 319 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 HCAR2Q8TDS4 363 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 GPR174Q9BXC1 333 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 FZD3Q9NPG1 666 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 ZNF214Q9UL59 606 aaPredicted RBP16.89■□□□□ 0.29
SORT1-201ENST00000256637 CLEC4AQ9UMR7 237 aa16.89■□□□□ 0.29
SORT1-201ENST00000256637 PRAMEF1O95521 474 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 FAM98BQ52LJ0 330 aaKnown RBP16.88■□□□□ 0.29
SORT1-201ENST00000256637 SLC44A4Q53GD3 710 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 THAP3Q8WTV1 239 aaPredicted RBP16.88■□□□□ 0.29
SORT1-201ENST00000256637 MR1Q95460 341 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 YIPF4Q9BSR8 244 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 CARD9Q9H257 536 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 HCRTO43612 131 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 GKP32189 559 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 STAG3L4Q8TBR4 150 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 DUSP9Q99956 384 aaKnown RBP16.88■□□□□ 0.29
SORT1-201ENST00000256637 SERHL2Q9H4I8 314 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 DNAJC18Q9H819 358 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 SERHLQ9NQF3 203 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 FZD9O00144 591 aa16.88■□□□□ 0.29
SORT1-201ENST00000256637 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms